Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 AC087752.1-201ENST00000391360 558 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC42Q96M95 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 RPS7P3-201ENST00000443360 580 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC245291.3-201ENST00000443400 292 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 TRIM60P16-201ENST00000444048 694 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 FTLP8-201ENST00000446770 267 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 SETP4-201ENST00000455717 868 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 Z83838.1-202ENST00000456225 839 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 MTCO1P55-201ENST00000489829 745 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 GLUD1P3-202ENST00000508551 200 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 CR383658.1-201ENST00000514609 734 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC097486.1-201ENST00000515331 210 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC110056.1-201ENST00000525759 911 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC084824.2-201ENST00000548906 345 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 NPM1P5-201ENST00000557228 838 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC42Q96M95 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC011891.2-201ENST00000604949 397 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 MIR6885-201ENST00000612241 66 ntBASIC6.34□□□□□ -1.39
CCDC42Q96M95 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
CCDC42Q96M95 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CCDC42Q96M95 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC42Q96M95 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.34□□□□□ -1.4
CCDC42Q96M95 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.34□□□□□ -1.4
CCDC42Q96M95 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC6.34□□□□□ -1.4
CCDC42Q96M95 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
CCDC42Q96M95 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 SAMM50P1-201ENST00000455403 1399 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 RNU1-134P-201ENST00000362935 165 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 RN7SKP279-201ENST00000411383 298 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC130360.1-201ENST00000425489 1117 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 RNU1-88P-201ENST00000459274 128 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC006539.1-201ENST00000481419 501 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 ZNF519P4-201ENST00000514008 125 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 RNA5SP96-201ENST00000516041 107 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC130365.2-201ENST00000525882 1201 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 MIR3157-201ENST00000578688 85 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 NDUFB9P1-201ENST00000604683 510 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC022400.9-201ENST00000623633 273 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 AC119674.1-217ENST00000641942 1086 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.33□□□□□ -1.4
CCDC42Q96M95 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
CCDC42Q96M95 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
CCDC42Q96M95 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC42Q96M95 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC42Q96M95 TCF12-205ENST00000537840 1598 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC42Q96M95 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC42Q96M95 NLRP3P1-201ENST00000622303 1785 ntBASIC6.32□□□□□ -1.4
CCDC42Q96M95 MTCO1P28-201ENST00000574177 1528 ntBASIC6.32□□□□□ -1.4
CCDC42Q96M95 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC42Q96M95 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 NPM1P37-201ENST00000403105 874 ntBASIC6.32□□□□□ -1.4
CCDC42Q96M95 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 VN1R20P-201ENST00000425215 966 ntBASIC6.32□□□□□ -1.4
CCDC42Q96M95 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.32□□□□□ -1.4
CCDC42Q96M95 AC242426.1-201ENST00000435270 960 ntBASIC6.32□□□□□ -1.4
CCDC42Q96M95 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CCDC42Q96M95 AC022730.1-201ENST00000473114 568 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms