Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SSX6-203ENST00000509958 336 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 RN7SKP288-201ENST00000516227 268 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC007225.2-201ENST00000562529 256 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 AP005431.1-201ENST00000618479 319 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 AL049767.1-202ENST00000637826 242 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 LCOR-201ENST00000286067 4542 ntBASIC8.31□□□□□ -1.08
CCDC7Q96M83 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CCDC7Q96M83 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC8.31□□□□□ -1.08
CCDC7Q96M83 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC7Q96M83 THAP12P9-201ENST00000503971 2360 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 NOL4-203ENST00000538587 1979 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC7Q96M83 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC7Q96M83 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC7Q96M83 TMSB4XP2-201ENST00000335179 210 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 AC073410.1-201ENST00000435125 589 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 AL445928.1-201ENST00000435545 222 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 RPS3AP38-201ENST00000435889 763 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 AL390879.1-201ENST00000439143 386 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 AP006222.1-205ENST00000450734 457 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 AL157777.1-201ENST00000468100 304 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 TMEM97P2-201ENST00000517841 403 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC7Q96M83 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC8.3□□□□□ -1.08
CCDC7Q96M83 AC110716.2-201ENST00000563865 3945 ntBASIC8.3□□□□□ -1.08
CCDC7Q96M83 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CCDC7Q96M83 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 GNG5P2-201ENST00000372054 207 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 MIR143-201ENST00000385300 106 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 RN7SKP293-201ENST00000411389 296 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 BX284632.2-201ENST00000421091 399 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 PCBP2P1-201ENST00000437262 977 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AL512605.1-202ENST00000441919 381 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AP000281.1-201ENST00000444036 316 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AL359955.2-201ENST00000445380 353 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AL445665.1-202ENST00000452436 324 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 RN7SL629P-201ENST00000489622 285 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC008638.1-201ENST00000506035 866 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AP000648.1-201ENST00000529682 397 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC012254.3-201ENST00000591183 2117 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AL031601.1-201ENST00000605702 394 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 AL021918.2-201ENST00000613415 194 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 IMMTP1-201ENST00000435590 2219 ntBASIC8.29□□□□□ -1.08
CCDC7Q96M83 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC8.29□□□□□ -1.08
CCDC7Q96M83 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CCDC7Q96M83 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
CCDC7Q96M83 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms