Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 EEF1A1P29-201ENST00000416082 1096 ntBASIC9.08□□□□□ -0.96
VPS8Q8N3P4 RPL34P3-201ENST00000421454 338 ntBASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 HMGB3P24-201ENST00000433260 622 ntBASIC9.08□□□□□ -0.96
VPS8Q8N3P4 RPS27AP2-201ENST00000457576 465 ntBASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AP001496.3-201ENST00000580230 913 ntBASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AL049840.6-201ENST00000604583 345 ntBASIC9.08□□□□□ -0.96
VPS8Q8N3P4 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 OR5AN1-202ENST00000641850 8468 ntAPPRIS P1 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.08□□□□□ -0.96
VPS8Q8N3P4 IMMTP1-201ENST00000435590 2219 ntBASIC9.08□□□□□ -0.96
VPS8Q8N3P4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 MEF2C-210ENST00000506554 3469 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 RNA5SP435-201ENST00000364044 108 ntBASIC9.07□□□□□ -0.96
VPS8Q8N3P4 METTL5-204ENST00000409340 472 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 NIFKP3-201ENST00000417799 865 ntBASIC9.07□□□□□ -0.96
VPS8Q8N3P4 OSTCP1-201ENST00000455507 450 ntBASIC9.07□□□□□ -0.96
VPS8Q8N3P4 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 RN7SL570P-201ENST00000484405 292 ntBASIC9.07□□□□□ -0.96
VPS8Q8N3P4 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 AL357153.4-201ENST00000620487 1016 ntBASIC9.07□□□□□ -0.96
VPS8Q8N3P4 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 AC068733.2-201ENST00000605434 1418 ntBASIC9.07□□□□□ -0.96
VPS8Q8N3P4 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC9.07□□□□□ -0.96
VPS8Q8N3P4 MRE11P1-201ENST00000464884 2127 ntBASIC9.07□□□□□ -0.96
VPS8Q8N3P4 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 RNA5SP234-201ENST00000363916 119 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 RNA5SP242-201ENST00000364171 118 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 RNA5SP91-201ENST00000390902 119 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 U3.25-201ENST00000391209 220 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AL391422.1-201ENST00000402155 436 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AL662874.1-201ENST00000426065 230 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 FMO7P-201ENST00000436045 768 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AC099521.1-201ENST00000482557 334 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AC104109.1-201ENST00000498563 436 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 SCARNA6.1-201ENST00000516989 238 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AL163952.1-202ENST00000569625 600 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 MIR4260-201ENST00000583107 67 ntBASIC9.06□□□□□ -0.96
VPS8Q8N3P4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 HNRNPR-210ENST00000478691 7646 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC9.06□□□□□ -0.96
VPS8Q8N3P4 LINC02019-201ENST00000608605 2060 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 RNA5SP131-201ENST00000365452 119 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 RNA5SP178-201ENST00000410380 128 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC002504.1-201ENST00000438281 691 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 EEF1B2P6-201ENST00000445713 673 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 AC073909.1-201ENST00000447112 999 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 OR2AF1P-201ENST00000454899 889 ntBASIC9.05□□□□□ -0.96
VPS8Q8N3P4 OARD1-211ENST00000480585 829 ntTSL 3 BASIC9.05□□□□□ -0.96
VPS8Q8N3P4 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC9.05□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms