Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP1Q04837 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.93□□□□□ -1.62
SSBP1Q04837 AC006206.1-201ENST00000544842 3387 ntBASIC4.93□□□□□ -1.62
SSBP1Q04837 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP1Q04837 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP1Q04837 AC008507.3-201ENST00000585753 472 ntBASIC4.93□□□□□ -1.62
SSBP1Q04837 COX6CP7-201ENST00000597056 208 ntBASIC4.93□□□□□ -1.62
SSBP1Q04837 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP1Q04837 AL669942.1-206ENST00000610473 783 ntTSL 3 BASIC4.93□□□□□ -1.62
SSBP1Q04837 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP1Q04837 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP1Q04837 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
SSBP1Q04837 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP1Q04837 CASC19-246ENST00000641625 1606 ntBASIC4.93□□□□□ -1.62
SSBP1Q04837 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP1Q04837 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SSBP1Q04837 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP1Q04837 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SSBP1Q04837 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC4.93□□□□□ -1.62
SSBP1Q04837 AC011755.1-201ENST00000623763 2049 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 ABCC13-202ENST00000463099 3842 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP1Q04837 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.92□□□□□ -1.62
SSBP1Q04837 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP1Q04837 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP1Q04837 SNORA48.4-201ENST00000391089 134 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 MIR1231-201ENST00000408101 92 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.92□□□□□ -1.62
SSBP1Q04837 GRM7-AS2-201ENST00000427748 520 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AL445928.1-201ENST00000435545 222 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 TCEA1P3-201ENST00000443005 880 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 COX6B1P2-201ENST00000489624 230 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 AL049874.2-201ENST00000492636 288 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC4.92□□□□□ -1.62
SSBP1Q04837 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AC096661.1-201ENST00000515870 822 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP1Q04837 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 RN7SL311P-201ENST00000579858 306 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AC145423.1-201ENST00000605712 336 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 MIR4435-2HG-219ENST00000609220 883 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC4.92□□□□□ -1.62
SSBP1Q04837 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC4.92□□□□□ -1.62
SSBP1Q04837 AC073488.3-201ENST00000631611 778 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC4.92□□□□□ -1.62
SSBP1Q04837 PTPRD-AS1-201ENST00000430766 1959 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.92□□□□□ -1.62
SSBP1Q04837 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SSBP1Q04837 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SSBP1Q04837 VN2R1P-201ENST00000449668 1743 ntBASIC4.92□□□□□ -1.62
SSBP1Q04837 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
SSBP1Q04837 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 ZNF710-AS1-202ENST00000620791 2133 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 MAPK10-328ENST00000641553 4009 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
SSBP1Q04837 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AP005435.3-201ENST00000531260 3198 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AL121886.1-201ENST00000358609 435 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AL157702.1-201ENST00000398764 426 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 AC010082.1-201ENST00000411797 546 ntTSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 HYALP1-201ENST00000417674 1279 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 AL360013.1-201ENST00000419031 858 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 RPS4XP5-201ENST00000419038 768 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AC019205.1-201ENST00000421830 730 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 GRPEL2P2-201ENST00000421856 670 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 RPSAP65-201ENST00000429660 595 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.91□□□□□ -1.62
SSBP1Q04837 RPS12P17-201ENST00000438591 377 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 SEPT14P12-201ENST00000442280 560 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 CXCR2P1-202ENST00000443392 1074 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 ZNF619P1-201ENST00000446539 752 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 RN7SL188P-201ENST00000469842 285 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC4.91□□□□□ -1.62
SSBP1Q04837 AP000797.2-201ENST00000475768 606 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 AC069304.1-201ENST00000491593 704 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 USP9YP2-201ENST00000504503 1000 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 USP9YP1-201ENST00000513521 1002 ntBASIC4.91□□□□□ -1.62
SSBP1Q04837 RNA5SP206-201ENST00000516703 121 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms