Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM4P67936 AC096775.1-201ENST00000437724 448 ntBASIC6.6□□□□□ -1.35
TPM4P67936 AL663074.2-201ENST00000440621 479 ntBASIC6.6□□□□□ -1.35
TPM4P67936 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM4P67936 RN7SL197P-201ENST00000466981 299 ntBASIC6.6□□□□□ -1.35
TPM4P67936 RPL34P33-201ENST00000486062 334 ntBASIC6.6□□□□□ -1.35
TPM4P67936 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM4P67936 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.6□□□□□ -1.35
TPM4P67936 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM4P67936 MIR378H-201ENST00000579966 83 ntBASIC6.6□□□□□ -1.35
TPM4P67936 MIR4732-201ENST00000581873 76 ntBASIC6.6□□□□□ -1.35
TPM4P67936 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 AC010503.3-201ENST00000594355 540 ntBASIC6.6□□□□□ -1.35
TPM4P67936 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.6□□□□□ -1.35
TPM4P67936 AC018690.1-201ENST00000608144 626 ntBASIC6.6□□□□□ -1.35
TPM4P67936 CLUHP10-201ENST00000631979 980 ntBASIC6.6□□□□□ -1.35
TPM4P67936 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM4P67936 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM4P67936 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
TPM4P67936 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
TPM4P67936 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
TPM4P67936 AC140479.2-201ENST00000421567 3130 ntBASIC6.6□□□□□ -1.35
TPM4P67936 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC6.6□□□□□ -1.35
TPM4P67936 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM4P67936 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 AL360270.2-201ENST00000562952 5985 ntBASIC6.59□□□□□ -1.35
TPM4P67936 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM4P67936 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.59□□□□□ -1.35
TPM4P67936 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
TPM4P67936 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM4P67936 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM4P67936 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM4P67936 AL157702.1-201ENST00000398764 426 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.59□□□□□ -1.35
TPM4P67936 RPL35AP31-201ENST00000418340 337 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 AC006509.1-201ENST00000420788 634 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM4P67936 AC094019.1-201ENST00000434678 472 ntBASIC6.59□□□□□ -1.35
TPM4P67936 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TPM4P67936 SLAMF6P1-201ENST00000451067 602 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM4P67936 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM4P67936 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM4P67936 AC126615.2-201ENST00000553003 515 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.59□□□□□ -1.35
TPM4P67936 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 AC099777.1-201ENST00000603779 1070 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AL390877.1-201ENST00000605704 214 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AL353729.2-201ENST00000605859 1249 ntBASIC6.59□□□□□ -1.35
TPM4P67936 AC096861.1-201ENST00000616652 240 ntBASIC6.59□□□□□ -1.35
TPM4P67936 MIR6849-201ENST00000618543 69 ntBASIC6.59□□□□□ -1.35
TPM4P67936 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 TEX41-271ENST00000628213 993 ntTSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 CCDC196-207ENST00000636229 1107 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
TPM4P67936 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
TPM4P67936 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.59□□□□□ -1.35
TPM4P67936 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.36
TPM4P67936 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
TPM4P67936 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
TPM4P67936 AC009962.1-201ENST00000567327 3813 ntBASIC6.58□□□□□ -1.36
TPM4P67936 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 EIF3EP1-201ENST00000433978 1316 ntBASIC6.58□□□□□ -1.36
TPM4P67936 AL080312.1-201ENST00000256654 824 ntBASIC6.58□□□□□ -1.36
TPM4P67936 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
TPM4P67936 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 RNA5SP187-201ENST00000384400 119 ntBASIC6.58□□□□□ -1.36
TPM4P67936 YWHAZP4-201ENST00000392459 708 ntBASIC6.58□□□□□ -1.36
TPM4P67936 MIR1266-201ENST00000408125 84 ntBASIC6.58□□□□□ -1.36
TPM4P67936 RN7SKP279-201ENST00000411383 298 ntBASIC6.58□□□□□ -1.36
TPM4P67936 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM4P67936 MTND2P12-201ENST00000417560 1252 ntBASIC6.58□□□□□ -1.36
TPM4P67936 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM4P67936 VN1R21P-201ENST00000426703 765 ntBASIC6.58□□□□□ -1.36
TPM4P67936 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM4P67936 OR6R1P-201ENST00000431838 940 ntBASIC6.58□□□□□ -1.36
TPM4P67936 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
TPM4P67936 AC234771.4-201ENST00000441416 730 ntBASIC6.58□□□□□ -1.36
TPM4P67936 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM4P67936 TREML3P-201ENST00000457327 501 ntBASIC6.58□□□□□ -1.36
TPM4P67936 AC134698.1-201ENST00000511619 643 ntBASIC6.58□□□□□ -1.36
TPM4P67936 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.58□□□□□ -1.36
TPM4P67936 RNA5SP434-201ENST00000516647 121 ntBASIC6.58□□□□□ -1.36
TPM4P67936 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC6.58□□□□□ -1.36
TPM4P67936 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.58□□□□□ -1.36
TPM4P67936 BMS1P16-201ENST00000556075 1147 ntBASIC6.58□□□□□ -1.36
TPM4P67936 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.58□□□□□ -1.36
TPM4P67936 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.58□□□□□ -1.36
TPM4P67936 AC091304.5-201ENST00000568969 158 ntBASIC6.58□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms