Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 RNU4-7P-201ENST00000364758 141 ntBASIC6.63□□□□□ -1.35
NEK3P51956 MIR137-201ENST00000385223 102 ntBASIC6.63□□□□□ -1.35
NEK3P51956 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
NEK3P51956 RNU2-18P-201ENST00000411224 162 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL359092.1-201ENST00000417156 265 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.63□□□□□ -1.35
NEK3P51956 AL121882.1-201ENST00000422893 417 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.63□□□□□ -1.35
NEK3P51956 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.63□□□□□ -1.35
NEK3P51956 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 AL157827.1-201ENST00000447622 132 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC6.63□□□□□ -1.35
NEK3P51956 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC6.63□□□□□ -1.35
NEK3P51956 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.63□□□□□ -1.35
NEK3P51956 AC068769.1-201ENST00000474767 2426 ntBASIC6.63□□□□□ -1.35
NEK3P51956 RPL23AP73-201ENST00000492507 471 ntBASIC6.63□□□□□ -1.35
NEK3P51956 SUMO1P1-201ENST00000497904 306 ntBASIC6.63□□□□□ -1.35
NEK3P51956 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC6.63□□□□□ -1.35
NEK3P51956 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.63□□□□□ -1.35
NEK3P51956 AC084337.1-201ENST00000524809 686 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AP005639.1-201ENST00000526939 192 ntBASIC6.63□□□□□ -1.35
NEK3P51956 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.63□□□□□ -1.35
NEK3P51956 RPL3P13-201ENST00000550415 216 ntBASIC6.63□□□□□ -1.35
NEK3P51956 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.63□□□□□ -1.35
NEK3P51956 AL162632.2-201ENST00000553933 399 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC6.63□□□□□ -1.35
NEK3P51956 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC6.63□□□□□ -1.35
NEK3P51956 AC012368.3-201ENST00000604190 219 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AC011891.2-201ENST00000604949 397 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL158211.2-201ENST00000607282 395 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.63□□□□□ -1.35
NEK3P51956 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AC005277.2-201ENST00000617898 390 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL445493.3-201ENST00000619568 477 ntBASIC6.63□□□□□ -1.35
NEK3P51956 RPL23AP61-201ENST00000623642 466 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AC018692.2-201ENST00000624130 348 ntBASIC6.63□□□□□ -1.35
NEK3P51956 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.63□□□□□ -1.35
NEK3P51956 AL596275.2-207ENST00000641188 675 ntBASIC6.63□□□□□ -1.35
NEK3P51956 CASC19-281ENST00000642118 1554 ntBASIC6.63□□□□□ -1.35
NEK3P51956 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.63□□□□□ -1.35
NEK3P51956 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
NEK3P51956 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.62□□□□□ -1.35
NEK3P51956 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 AC005225.5-201ENST00000623547 2225 ntBASIC6.62□□□□□ -1.35
NEK3P51956 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEK3P51956 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
NEK3P51956 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 HSPD1P8-201ENST00000400121 1658 ntBASIC6.62□□□□□ -1.35
NEK3P51956 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 AC090181.3-201ENST00000624777 1514 ntBASIC6.62□□□□□ -1.35
NEK3P51956 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.62□□□□□ -1.35
NEK3P51956 AC022613.3-201ENST00000560740 1346 ntBASIC6.62□□□□□ -1.35
NEK3P51956 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.62□□□□□ -1.35
NEK3P51956 RNU1-84P-201ENST00000365447 164 ntBASIC6.62□□□□□ -1.35
NEK3P51956 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
NEK3P51956 PRELID1P1-201ENST00000403549 660 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AL451046.1-201ENST00000406097 534 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AL023284.3-201ENST00000407767 334 ntBASIC6.62□□□□□ -1.35
NEK3P51956 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 SDR42E1P3-201ENST00000438345 502 ntBASIC6.62□□□□□ -1.35
NEK3P51956 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.62□□□□□ -1.35
NEK3P51956 AC069277.2-201ENST00000454211 432 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.62□□□□□ -1.35
NEK3P51956 RPL23AP64-201ENST00000469465 435 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC6.62□□□□□ -1.35
NEK3P51956 RN7SL165P-201ENST00000477476 291 ntBASIC6.62□□□□□ -1.35
NEK3P51956 GUSBP9-201ENST00000510138 584 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.62□□□□□ -1.35
NEK3P51956 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC6.62□□□□□ -1.35
NEK3P51956 SCARNA5-201ENST00000516201 276 ntBASIC6.62□□□□□ -1.35
NEK3P51956 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.62□□□□□ -1.35
NEK3P51956 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.62□□□□□ -1.35
NEK3P51956 NOP56P3-201ENST00000549457 385 ntBASIC6.62□□□□□ -1.35
NEK3P51956 AC121758.1-202ENST00000556917 658 ntBASIC6.62□□□□□ -1.35
NEK3P51956 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
NEK3P51956 AC079148.1-201ENST00000565944 819 ntBASIC6.62□□□□□ -1.35
NEK3P51956 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.62□□□□□ -1.35
NEK3P51956 AC068020.1-201ENST00000594215 661 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms