Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.9□□□□□ -1.46
SHMT2P34897 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHMT2P34897 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 HCG14-201ENST00000444986 413 ntTSL 2 BASIC5.9□□□□□ -1.46
SHMT2P34897 ZNF619P1-201ENST00000446539 752 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC016027.4-201ENST00000450866 277 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 RN7SL352P-201ENST00000466002 277 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC5.9□□□□□ -1.46
SHMT2P34897 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.9□□□□□ -1.46
SHMT2P34897 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.9□□□□□ -1.46
SHMT2P34897 AL158068.1-201ENST00000506116 616 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.9□□□□□ -1.46
SHMT2P34897 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.9□□□□□ -1.46
SHMT2P34897 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SHMT2P34897 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SHMT2P34897 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.9□□□□□ -1.46
SHMT2P34897 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.9□□□□□ -1.46
SHMT2P34897 CYCSP38-201ENST00000559840 322 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.9□□□□□ -1.46
SHMT2P34897 RNU4ATAC-201ENST00000580972 127 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC134669.1-201ENST00000581275 672 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC079315.1-201ENST00000602952 623 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC096861.1-201ENST00000616652 240 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AL031658.2-201ENST00000616850 651 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 AC245014.3-201ENST00000618589 347 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
SHMT2P34897 AC073488.3-201ENST00000631611 778 ntBASIC5.9□□□□□ -1.46
SHMT2P34897 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.9□□□□□ -1.47
SHMT2P34897 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHMT2P34897 AC008627.1-201ENST00000517511 1704 ntBASIC5.9□□□□□ -1.47
SHMT2P34897 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHMT2P34897 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHMT2P34897 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.9□□□□□ -1.47
SHMT2P34897 AL591135.1-201ENST00000401578 5914 ntBASIC5.9□□□□□ -1.47
SHMT2P34897 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHMT2P34897 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SHMT2P34897 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 LYARP1-201ENST00000436977 1501 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AL359955.1-201ENST00000455242 3275 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.89□□□□□ -1.47
SHMT2P34897 AC123769.1-201ENST00000530992 3192 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SHMT2P34897 MIR130B-202ENST00000385018 82 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 RN7SKP151-201ENST00000410230 316 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AKR1B10P1-201ENST00000425765 942 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.89□□□□□ -1.47
SHMT2P34897 ATP5LP2-201ENST00000440646 311 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 AL512593.1-201ENST00000444758 779 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 CFL1P4-201ENST00000451536 498 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.89□□□□□ -1.47
SHMT2P34897 PPP1R11P1-201ENST00000486095 376 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AC083795.1-201ENST00000491760 320 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AC090058.1-201ENST00000498788 435 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AC008945.1-201ENST00000505144 499 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 LDHAP1-201ENST00000509421 992 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 LINC01151-201ENST00000521608 571 ntTSL 4 BASIC5.89□□□□□ -1.47
SHMT2P34897 RPA2P1-201ENST00000556557 721 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.89□□□□□ -1.47
SHMT2P34897 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.89□□□□□ -1.47
SHMT2P34897 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 AP001267.4-201ENST00000602598 545 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.89□□□□□ -1.47
SHMT2P34897 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SHMT2P34897 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SHMT2P34897 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SHMT2P34897 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.89□□□□□ -1.47
SHMT2P34897 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SHMT2P34897 AP001157.1-201ENST00000550837 2339 ntBASIC5.88□□□□□ -1.47
SHMT2P34897 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
SHMT2P34897 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.88□□□□□ -1.47
SHMT2P34897 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHMT2P34897 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
SHMT2P34897 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
SHMT2P34897 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
SHMT2P34897 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.88□□□□□ -1.47
SHMT2P34897 AP000432.2-201ENST00000624164 2048 ntBASIC5.88□□□□□ -1.47
SHMT2P34897 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.88□□□□□ -1.47
SHMT2P34897 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
SHMT2P34897 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.88□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms