Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC4.86□□□□□ -1.63
CCL3L1P16619 AL136131.3-201ENST00000607600 188 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC4.86□□□□□ -1.63
CCL3L1P16619 U1.25-201ENST00000614085 162 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 U1.34-201ENST00000618578 162 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 U1.31-201ENST00000620022 160 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 AL355306.2-203ENST00000635102 1025 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 MAPK10-350ENST00000641777 965 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 CYP39A1-205ENST00000619708 2269 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 AL359955.1-201ENST00000455242 3275 ntBASIC4.86□□□□□ -1.63
CCL3L1P16619 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCL3L1P16619 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CCL3L1P16619 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CCL3L1P16619 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
CCL3L1P16619 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 ZNF840P-201ENST00000504759 1996 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCL3L1P16619 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCL3L1P16619 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CCL3L1P16619 PKIB-203ENST00000368446 556 ntTSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC016739.1-201ENST00000405359 345 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC4.85□□□□□ -1.63
CCL3L1P16619 BX323845.3-201ENST00000428215 527 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.85□□□□□ -1.63
CCL3L1P16619 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.85□□□□□ -1.63
CCL3L1P16619 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC093166.4-201ENST00000457867 318 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC4.85□□□□□ -1.63
CCL3L1P16619 TRBV5-2-201ENST00000489095 273 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 RN7SL57P-201ENST00000493687 290 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC4.85□□□□□ -1.63
CCL3L1P16619 TOMM22P4-201ENST00000511318 336 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.85□□□□□ -1.63
CCL3L1P16619 MIR2117-201ENST00000516780 80 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 TRIM77BP-201ENST00000524985 1119 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 PCNAP4-201ENST00000532690 730 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 AP003789.1-201ENST00000617737 605 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 AL445670.1-201ENST00000618889 801 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 FO681491.1-202ENST00000623392 737 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 AC129778.1-202ENST00000623812 261 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 AL591379.1-207ENST00000635982 261 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 AMYH02020865.1-205ENST00000636189 261 ntBASIC4.85□□□□□ -1.63
CCL3L1P16619 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC4.85□□□□□ -1.63
CCL3L1P16619 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CCL3L1P16619 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CCL3L1P16619 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CCL3L1P16619 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL3L1P16619 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC4.84□□□□□ -1.63
CCL3L1P16619 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
CCL3L1P16619 ZNF969P-201ENST00000510345 2341 ntBASIC4.84□□□□□ -1.63
CCL3L1P16619 IMMTP1-201ENST00000435590 2219 ntBASIC4.84□□□□□ -1.63
CCL3L1P16619 AP004289.1-201ENST00000436307 2205 ntBASIC4.84□□□□□ -1.63
CCL3L1P16619 AC005224.3-201ENST00000584683 2140 ntBASIC4.84□□□□□ -1.63
CCL3L1P16619 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CCL3L1P16619 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL3L1P16619 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL3L1P16619 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL3L1P16619 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL3L1P16619 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL3L1P16619 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CCL3L1P16619 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
CCL3L1P16619 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL3L1P16619 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL3L1P16619 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
CCL3L1P16619 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC4.84□□□□□ -1.63
CCL3L1P16619 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.84□□□□□ -1.63
CCL3L1P16619 AC126120.1-201ENST00000431082 470 ntBASIC4.84□□□□□ -1.63
CCL3L1P16619 SUMO2P8-201ENST00000434672 286 ntBASIC4.84□□□□□ -1.63
CCL3L1P16619 PCBP2P1-201ENST00000437262 977 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms