Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC009362.1-201ENST00000427253 406 ntBASIC5.79□□□□□ -1.48
SNX3O60493 E2F6P1-201ENST00000428850 745 ntBASIC5.79□□□□□ -1.48
SNX3O60493 EMC3-AS1-205ENST00000438698 534 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX3O60493 E2F6P3-201ENST00000441743 743 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AC092421.1-201ENST00000448148 418 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 RPL21P42-201ENST00000488408 464 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AC106760.2-201ENST00000504159 619 ntBASIC5.79□□□□□ -1.48
SNX3O60493 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 AC026979.2-201ENST00000523733 583 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AC008055.1-201ENST00000547032 609 ntBASIC5.79□□□□□ -1.48
SNX3O60493 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX3O60493 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
SNX3O60493 AC008507.3-201ENST00000585753 472 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC5.79□□□□□ -1.48
SNX3O60493 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 AC012175.1-201ENST00000603755 531 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX3O60493 AC083964.1-201ENST00000607549 630 ntBASIC5.79□□□□□ -1.48
SNX3O60493 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC5.79□□□□□ -1.48
SNX3O60493 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
SNX3O60493 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 AC006206.1-201ENST00000544842 3387 ntBASIC5.79□□□□□ -1.48
SNX3O60493 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SNX3O60493 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.79□□□□□ -1.48
SNX3O60493 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX3O60493 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 AC083899.1-201ENST00000454465 3819 ntBASIC5.78□□□□□ -1.48
SNX3O60493 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC5.78□□□□□ -1.48
SNX3O60493 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX3O60493 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX3O60493 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX3O60493 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SNX3O60493 AL138847.1-201ENST00000258651 546 ntBASIC5.78□□□□□ -1.48
SNX3O60493 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
SNX3O60493 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 YWHAZP5-201ENST00000419975 730 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AL590095.1-201ENST00000420049 436 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 AC002127.1-201ENST00000421305 225 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.78□□□□□ -1.48
SNX3O60493 RPL3P11-201ENST00000434028 1146 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 HIGD1AP16-201ENST00000450986 258 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AL133351.3-201ENST00000454998 193 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AC004129.2-201ENST00000457229 287 ntBASIC5.78□□□□□ -1.48
SNX3O60493 SNORD125-201ENST00000459538 96 ntBASIC5.78□□□□□ -1.48
SNX3O60493 RNU7-157P-201ENST00000459600 66 ntBASIC5.78□□□□□ -1.48
SNX3O60493 RN7SL91P-201ENST00000469313 291 ntBASIC5.78□□□□□ -1.48
SNX3O60493 RPL10P7-201ENST00000495649 625 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AC026782.2-201ENST00000510845 636 ntBASIC5.78□□□□□ -1.48
SNX3O60493 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.78□□□□□ -1.48
SNX3O60493 RNA5SP434-201ENST00000516647 121 ntBASIC5.78□□□□□ -1.48
SNX3O60493 OR4A17P-201ENST00000526032 904 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 ONECUT1-202ENST00000560699 996 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX3O60493 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC5.78□□□□□ -1.48
SNX3O60493 AL049840.6-201ENST00000604583 345 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 NANOGP3-201ENST00000605855 286 ntBASIC5.78□□□□□ -1.48
SNX3O60493 SNORA35B-201ENST00000607417 129 ntBASIC5.78□□□□□ -1.48
SNX3O60493 STARD13-AS-224ENST00000608496 787 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX3O60493 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AL445670.1-201ENST00000618889 801 ntBASIC5.78□□□□□ -1.48
SNX3O60493 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 AL138693.1-201ENST00000622219 129 ntBASIC5.78□□□□□ -1.48
SNX3O60493 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC5.78□□□□□ -1.48
SNX3O60493 AC073488.6-201ENST00000632293 754 ntBASIC5.78□□□□□ -1.48
SNX3O60493 AC119674.1-202ENST00000641333 1860 ntBASIC5.78□□□□□ -1.48
SNX3O60493 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 RBMY1HP-201ENST00000382759 1389 ntBASIC5.78□□□□□ -1.48
SNX3O60493 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.78□□□□□ -1.48
SNX3O60493 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SNX3O60493 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SNX3O60493 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
SNX3O60493 FBXL21-201ENST00000297158 1305 ntBASIC5.77□□□□□ -1.49
SNX3O60493 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms