Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC010894.1-201ENST00000313760 361 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 SNORD35A-201ENST00000363389 86 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AF228730.1-201ENST00000397972 663 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 SNORA11.5-201ENST00000408163 128 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC099535.1-201ENST00000408928 371 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC069282.1-201ENST00000411911 526 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 MTND4LP17-201ENST00000414607 293 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 USP12PY-201ENST00000427677 1064 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AL512637.2-201ENST00000431287 1256 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC003989.1-201ENST00000434569 565 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 RPEP4-201ENST00000437636 602 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC020898.1-201ENST00000474167 787 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 RPS3AP15-201ENST00000483874 781 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC105233.1-201ENST00000498840 781 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC093870.1-201ENST00000506837 213 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC010468.3-201ENST00000508225 458 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 SETP21-201ENST00000514799 892 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC084337.1-201ENST00000524809 686 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 KCTD9P4-201ENST00000526766 1166 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 YWHAZP1-201ENST00000556286 722 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC019257.2-201ENST00000605539 497 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC024255.1-201ENST00000614376 102 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC084824.4-201ENST00000620106 731 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC211486.4-201ENST00000621495 113 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AP003476.1-201ENST00000623984 516 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AL731532.1-201ENST00000623972 4236 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 AC106754.1-201ENST00000562632 1513 ntBASIC6.49□□□□□ -1.37
CCDC78A2IDD5 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CCDC78A2IDD5 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 OR4K17-201ENST00000315543 1032 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 OR56A4-201ENST00000330728 1209 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 RNU6-618P-201ENST00000363518 112 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 RNU6-152P-201ENST00000384037 107 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AL050335.1-201ENST00000396909 869 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AMZ2P2-201ENST00000406819 1057 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 RN7SKP281-201ENST00000410472 352 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 RPL23AP85-201ENST00000421838 433 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 LARP7P4-201ENST00000481075 878 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 RN7SL502P-201ENST00000481857 290 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC009879.1-201ENST00000520029 839 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC073916.1-201ENST00000545095 130 ntBASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC78A2IDD5 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms