Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.69□□□□□ -1.5
VPS29Q9UBQ0 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC130360.2-201ENST00000533477 1556 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC012254.3-201ENST00000591183 2117 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 HSPD1P9-201ENST00000420325 1636 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RNA5SP514-201ENST00000363717 111 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RBBP4P5-201ENST00000398583 1266 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 KATNBL1P2-201ENST00000433311 835 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AL445928.1-201ENST00000435545 222 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RPL5P7-201ENST00000444235 813 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AL445466.1-201ENST00000448432 357 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 OR52I1-201ENST00000450052 1050 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RSU1P1-201ENST00000453416 441 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC023245.1-201ENST00000468501 517 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RPL38P3-201ENST00000484463 213 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC078899.1-201ENST00000521432 1185 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC090424.1-201ENST00000535243 736 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 OR7A8P-201ENST00000595427 913 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC005828.7-201ENST00000607331 556 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 MIR6721-201ENST00000617181 87 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 SAMMSON-210ENST00000641260 1308 ntBASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
VPS29Q9UBQ0 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 RN7SKP86-201ENST00000410454 332 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 RPSAP40-201ENST00000442343 891 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC090058.1-201ENST00000498788 435 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 MIR2117-201ENST00000516780 80 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 SNORA81.2-201ENST00000516868 170 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AL121594.2-201ENST00000541658 472 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 HNRNPCP1-201ENST00000556181 766 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC093524.1-201ENST00000564266 1094 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 MIR744-201ENST00000578242 98 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 AC068768.2-201ENST00000602352 343 ntBASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.67□□□□□ -1.5
VPS29Q9UBQ0 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms