Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 Y_RNA.110-201ENST00000363220 99 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 MTND4LP7-201ENST00000431728 294 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USP35Q9P2H5 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 CCRL1P1-201ENST00000449542 1053 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 NXT1P1-201ENST00000458481 316 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 RN7SL382P-201ENST00000482631 282 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC138123.2-201ENST00000550324 579 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC092868.3-201ENST00000560515 784 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 LINC00556-201ENST00000569603 412 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 NPIPB1P-202ENST00000588786 828 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC8.72□□□□□ -1.01
USP35Q9P2H5 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.72□□□□□ -1.01
USP35Q9P2H5 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USP35Q9P2H5 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC8.72□□□□□ -1.01
USP35Q9P2H5 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC8.72□□□□□ -1.01
USP35Q9P2H5 DMD-211ENST00000378707 7410 ntTSL 5 BASIC8.71□□□□□ -1.01
USP35Q9P2H5 AL662795.2-201ENST00000624252 3706 ntBASIC8.71□□□□□ -1.01
USP35Q9P2H5 OLMALINC-203ENST00000641087 3779 ntBASIC8.71□□□□□ -1.01
USP35Q9P2H5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
USP35Q9P2H5 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.71□□□□□ -1.01
USP35Q9P2H5 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.01
USP35Q9P2H5 TTLL5-217ENST00000556893 3071 ntTSL 1 (best) BASIC8.71□□□□□ -1.01
USP35Q9P2H5 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.71□□□□□ -1.01
USP35Q9P2H5 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.01
USP35Q9P2H5 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 MIR421-201ENST00000365696 85 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 RN7SKP62-201ENST00000384539 329 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 RPL7P58-201ENST00000402913 758 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 RN7SKP278-201ENST00000410504 342 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AL691517.1-201ENST00000440833 1235 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 AL034399.1-201ENST00000451535 380 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC098847.1-201ENST00000473094 348 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC007998.1-201ENST00000474156 672 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC092574.1-201ENST00000609771 420 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 ALB-220ENST00000621628 1606 ntTSL 5 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC8.71□□□□□ -1.02
USP35Q9P2H5 AC003985.2-201ENST00000562268 1669 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
USP35Q9P2H5 SFTPD-AS1-201ENST00000608229 5001 ntBASIC8.71□□□□□ -1.02
USP35Q9P2H5 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 AL359976.1-201ENST00000418655 3528 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC130360.2-201ENST00000533477 1556 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 HSPD1P9-201ENST00000420325 1636 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
USP35Q9P2H5 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 MIR323A-201ENST00000362199 86 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 MIR130B-202ENST00000385018 82 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 GTF3AP1-201ENST00000416942 1004 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 MTND6P12-201ENST00000428247 522 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 RPL17P35-201ENST00000432217 549 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC094019.1-201ENST00000434678 472 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC8.7□□□□□ -1.02
USP35Q9P2H5 EIF2S2P4-201ENST00000461070 984 ntBASIC8.7□□□□□ -1.02
USP35Q9P2H5 AC104629.2-201ENST00000468627 598 ntBASIC8.7□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms