Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MIR2117-201ENST00000516780 80 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 TRIM77BP-201ENST00000524985 1119 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 CASP5-209ENST00000531367 879 ntTSL 5 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 OR11H2-202ENST00000641517 1085 ntBASIC6.3□□□□□ -1.4
CISHQ9NSE2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.3□□□□□ -1.4
CISHQ9NSE2 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CISHQ9NSE2 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AL121977.1-201ENST00000401636 979 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 OR52E7P-201ENST00000452394 933 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 OSTCP1-201ENST00000455507 450 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AL157777.1-201ENST00000468100 304 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AL122020.1-201ENST00000472287 459 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 PCNAP4-201ENST00000532690 730 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC068305.2-201ENST00000550567 1205 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC006530.1-201ENST00000555980 571 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC091078.2-201ENST00000557145 559 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AL356801.1-201ENST00000559320 294 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC079315.1-201ENST00000602952 623 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AL139099.4-201ENST00000614802 114 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC129778.1-202ENST00000623812 261 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AL591379.1-207ENST00000635982 261 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 MAPK10-350ENST00000641777 965 ntBASIC6.29□□□□□ -1.4
CISHQ9NSE2 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CISHQ9NSE2 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CISHQ9NSE2 AC093829.1-201ENST00000506662 1618 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 IMMTP1-201ENST00000435590 2219 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 RNU4-64P-201ENST00000410795 131 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 USP24P1-201ENST00000433802 779 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 DNAJA1P5-201ENST00000440278 943 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 AC060775.1-201ENST00000518241 520 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 AC090424.1-201ENST00000535243 736 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 FO681491.1-202ENST00000623392 737 ntBASIC6.28□□□□□ -1.4
CISHQ9NSE2 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
CISHQ9NSE2 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CISHQ9NSE2 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms