Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 SLC15A2-205ENST00000489711 5673 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 CARD8-202ENST00000391898 5263 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 SPATA31B1P-201ENST00000434692 4016 ntBASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 PPM1L-205ENST00000498165 10934 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
PDLIM7Q9NR12 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC026316.3-201ENST00000497988 3097 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 MAPK10-323ENST00000641493 3207 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 LINC01751-201ENST00000569178 1770 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 VTRNA3-1P-201ENST00000362552 102 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 RNA5SP510-201ENST00000364697 99 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 SNORD115-48-201ENST00000364764 76 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 Y_RNA.318-201ENST00000365131 97 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 CD2-201ENST00000369477 478 ntTSL 2 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AL713922.1-201ENST00000416477 747 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 USP9YP14-201ENST00000430663 563 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 TVP23CP1-201ENST00000450317 639 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 VN1R40P-201ENST00000455196 941 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 CABYRP1-201ENST00000465493 1045 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC116562.1-201ENST00000485355 781 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AP002453.1-201ENST00000492327 668 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 RPL5P14-201ENST00000494197 878 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC063943.2-201ENST00000495697 534 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 MTND4LP2-201ENST00000502312 285 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 SUMO2P5-201ENST00000506790 245 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC108157.1-201ENST00000510511 539 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 RNA5SP418-201ENST00000515951 117 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC087664.2-202ENST00000521274 515 ntTSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC015818.6-201ENST00000584274 634 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC107993.1-201ENST00000591343 684 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 PCNAP1-202ENST00000595299 752 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC011492.1-201ENST00000600023 315 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC113368.1-201ENST00000603736 382 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC100767.2-201ENST00000604840 693 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC080013.3-201ENST00000606839 578 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 MIR6768-201ENST00000610734 72 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 MIR8084-201ENST00000614105 89 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC021755.4-201ENST00000616620 456 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 MIR6811-201ENST00000620409 58 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC130448.2-201ENST00000624082 374 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AL121594.5-201ENST00000631724 573 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AL596244.1-201ENST00000567068 3779 ntBASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
PDLIM7Q9NR12 AP003119.3-201ENST00000566747 4192 ntBASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
PDLIM7Q9NR12 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms