Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 NEPNP-201ENST00000404786 1371 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 SNRPEP6-201ENST00000407465 277 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 RPS6P23-201ENST00000413224 722 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC245060.4-201ENST00000413293 1121 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC008629.2-201ENST00000503783 483 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC022826.1-201ENST00000519383 805 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 DPPA2P4-201ENST00000563717 878 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AC022919.1-201ENST00000624979 626 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 AL596275.2-208ENST00000641192 594 ntBASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
KIAA1549Q9HCM3 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 ST7-203ENST00000393443 2360 ntTSL 2 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 RNA5SP234-201ENST00000363916 119 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 EEF1B2P6-201ENST00000445713 673 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 ACA64.1-201ENST00000459171 127 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC087360.1-201ENST00000518788 616 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 MIR4311-201ENST00000580794 100 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC024589.2-201ENST00000605642 1294 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC109309.2-201ENST00000612597 332 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC126175.1-201ENST00000617041 758 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AL355974.3-201ENST00000617383 467 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC129778.1-202ENST00000623812 261 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AL591379.1-207ENST00000635982 261 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 OR11H2-202ENST00000641517 1085 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 OFD1P17-201ENST00000437639 3018 ntBASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
KIAA1549Q9HCM3 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC123769.1-201ENST00000530992 3192 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 RNA5SP435-201ENST00000364044 108 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC245096.1-201ENST00000413104 546 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AL035660.1-201ENST00000422041 222 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 RPS3AP15-201ENST00000483874 781 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC106872.4-201ENST00000510050 523 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC027667.1-201ENST00000545814 304 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 RN7SKP286-201ENST00000410894 299 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC127526.2-201ENST00000426436 775 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 BX119321.1-201ENST00000428912 797 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 AC006539.1-201ENST00000481419 501 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 PPIAP19-201ENST00000486414 492 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 RPL23AP40-201ENST00000487630 390 ntBASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.31□□□□□ -1.56
KIAA1549Q9HCM3 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.31□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms