Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AP002453.1-201ENST00000492327 668 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 OR52A4P-203ENST00000498233 1014 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC090958.1-201ENST00000511122 351 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 TOMM22P4-201ENST00000511318 336 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 RN7SKP183-201ENST00000517169 324 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AP003080.1-202ENST00000526526 915 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 OOSP1P2-201ENST00000579644 351 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC093388.1-201ENST00000609166 430 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC111152.1-202ENST00000635848 339 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 AC018717.1-201ENST00000457712 1505 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.25□□□□□ -1.41
PCDH9Q9HC56 KYNUP3-201ENST00000574386 1341 ntBASIC6.25□□□□□ -1.41
PCDH9Q9HC56 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 MSL3P1-202ENST00000440028 1468 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 RNA5SP375-201ENST00000362975 119 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 RNA5SP232-201ENST00000364144 119 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 NPM1P10-201ENST00000398310 865 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 RBBP4P5-201ENST00000398583 1266 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC245096.1-201ENST00000413104 546 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 VN1R3-201ENST00000418822 919 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 NME1P1-201ENST00000420914 382 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 CUBNP2-201ENST00000443534 1139 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC010240.2-201ENST00000445363 1205 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 SEPHS1P4-201ENST00000446112 1176 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 EEF1B2P3-201ENST00000447718 678 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 CCDC11P1-201ENST00000503137 1162 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 IGKV2-19-201ENST00000518132 283 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 OR1E3-201ENST00000575608 948 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC005224.3-201ENST00000584683 2140 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC119403.2-201ENST00000590960 598 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AL359091.2-201ENST00000609303 556 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AL080312.2-201ENST00000613001 630 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AL357140.4-201ENST00000636827 412 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 AC005261.2-201ENST00000593427 4258 ntBASIC6.24□□□□□ -1.41
PCDH9Q9HC56 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PCDH9Q9HC56 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.23□□□□□ -1.41
PCDH9Q9HC56 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms