Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AL161725.1-203ENST00000415004 1081 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 PPIAP30-201ENST00000415473 519 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC007365.2-201ENST00000428806 458 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC009299.1-201ENST00000429684 717 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 HMGN2P24-201ENST00000433516 273 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 AL162231.2-201ENST00000434627 665 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 LYSMD1-202ENST00000440902 1003 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 PRSS48-201ENST00000441586 560 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AL354714.5-201ENST00000450131 590 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.29□□□□□ -1.72
LITAFQ99732 RPL34P22-201ENST00000468193 318 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 RPL21P47-201ENST00000483696 477 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 TPT1P3-201ENST00000492841 512 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC082651.2-201ENST00000496833 166 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 SNX18P23-201ENST00000510867 677 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 RNA5SP518-201ENST00000515957 119 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 RNU6-311P-201ENST00000516224 102 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AP003084.1-201ENST00000524828 742 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 MTATP6P15-201ENST00000527233 835 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AP000916.1-201ENST00000533869 835 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC091515.1-201ENST00000548110 679 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC103740.1-204ENST00000557994 570 ntTSL 4 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 DNM1P47-201ENST00000560757 334 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC091304.4-201ENST00000565703 620 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 TTC39A-AS1-202ENST00000568425 554 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 AL161725.1-210ENST00000590240 1224 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 BNIP3P24-201ENST00000593398 557 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC245036.5-201ENST00000596330 847 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 DUXAP3-201ENST00000603616 594 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 STARD13-AS-247ENST00000610879 779 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC084782.3-201ENST00000612282 578 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC015722.2-201ENST00000622210 551 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 HLA-B-257ENST00000640094 147 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC138907.8-201ENST00000623981 2256 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 SELE-204ENST00000367776 3576 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 SELE-205ENST00000367777 3576 ntTSL 5 BASIC4.29□□□□□ -1.72
LITAFQ99732 AC109446.4-201ENST00000623235 2755 ntBASIC4.29□□□□□ -1.72
LITAFQ99732 MAK-205ENST00000538030 2459 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
LITAFQ99732 SFR1-201ENST00000369727 1438 ntAPPRIS P4 TSL 2 BASIC4.29□□□□□ -1.72
LITAFQ99732 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
LITAFQ99732 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 PPBPP2-201ENST00000513150 1362 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LITAFQ99732 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 AC012321.1-201ENST00000561622 1588 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 GOT2P1-201ENST00000440922 1309 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC4.28□□□□□ -1.72
LITAFQ99732 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC4.28□□□□□ -1.72
LITAFQ99732 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
LITAFQ99732 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LITAFQ99732 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
LITAFQ99732 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.28□□□□□ -1.72
LITAFQ99732 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.28□□□□□ -1.72
LITAFQ99732 FAUP2-201ENST00000394301 401 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 RPL7-203ENST00000396466 762 ntTSL 3 BASIC4.28□□□□□ -1.72
LITAFQ99732 AC007068.1-201ENST00000396690 844 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 GAPDHP15-201ENST00000398586 975 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 AL391422.1-201ENST00000402155 436 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 RPL5P19-201ENST00000404228 893 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 SMARCE1P1-201ENST00000417747 1186 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 AL354766.1-201ENST00000423396 542 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC4.28□□□□□ -1.72
LITAFQ99732 AC092648.1-201ENST00000425870 423 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 AC130472.1-201ENST00000427885 309 ntBASIC4.28□□□□□ -1.72
LITAFQ99732 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
LITAFQ99732 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.28□□□□□ -1.72
LITAFQ99732 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC4.28□□□□□ -1.72
LITAFQ99732 TTC21B-AS1-202ENST00000443032 544 ntTSL 4 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms