Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AL133399.1-201ENST00000527476 298 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AGGF1P7-201ENST00000562369 913 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AL589765.6-201ENST00000601909 549 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AL671309.1-201ENST00000603750 544 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC013562.2-201ENST00000611632 603 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AP003485.2-201ENST00000623636 610 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC017104.5-201ENST00000637647 639 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 MAPK10-344ENST00000641718 3746 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC006600.2-201ENST00000624834 2506 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 AC105114.1-201ENST00000624795 1862 ntBASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
CDK5RAP1Q96SZ6 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC011455.2-201ENST00000599320 3336 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 YWHAZP4-201ENST00000392459 708 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AL050335.1-201ENST00000396909 869 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 RNU2-18P-201ENST00000411224 162 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 EMC3-AS1-205ENST00000438698 534 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 TIMM8BP2-201ENST00000445940 251 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC097359.1-201ENST00000447946 463 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 MTND2P30-201ENST00000456663 382 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC019084.1-201ENST00000457337 432 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC104164.3-201ENST00000467363 1258 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AL133372.1-201ENST00000493565 745 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 SNORA58-201ENST00000505219 137 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC027338.1-201ENST00000514840 825 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 OR52K3P-201ENST00000531655 943 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 MTND2P17-201ENST00000550281 688 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AL442163.2-201ENST00000553912 710 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 WBP1LP12-201ENST00000604449 331 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 CYCSP1-201ENST00000604815 315 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC025175.1-201ENST00000606482 759 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AL596275.2-207ENST00000641188 675 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AL121936.2-201ENST00000641935 662 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC008691.1-209ENST00000642094 814 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC010624.4-201ENST00000597606 1351 ntBASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 ABI1-207ENST00000376142 3576 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP1Q96SZ6 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP1Q96SZ6 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 123.7 ms