Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 RN7SL165P-201ENST00000477476 291 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AC010343.2-201ENST00000510162 224 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 RNU6-1334P-201ENST00000516032 105 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 RN7SKP248-201ENST00000516278 305 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AP003080.1-202ENST00000526526 915 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AC005632.2-201ENST00000564271 828 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 MTND4LP25-201ENST00000570218 163 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 DYNLL1P1-201ENST00000595442 269 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AL135999.3-201ENST00000610501 812 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 MIR6071-201ENST00000616741 78 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 AL157831.2-201ENST00000564681 3095 ntBASIC7.55□□□□□ -1.2
CHMP4CQ96CF2 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 SNORD16-201ENST00000362803 99 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 RNU6-1331P-201ENST00000363658 106 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LCN1P2-201ENST00000372030 223 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AL451142.1-201ENST00000375867 775 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 YWHAZP6-201ENST00000399764 738 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 VN1R12P-201ENST00000403778 876 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 GCNT1P4-201ENST00000404096 329 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 UBE2V1P14-201ENST00000415815 558 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 CYP4F30P-202ENST00000420048 405 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC002069.1-201ENST00000429649 1159 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC108479.1-201ENST00000431142 427 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 RPL17P35-201ENST00000432217 549 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC128716.1-201ENST00000475129 166 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 RN7SL170P-201ENST00000487098 295 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AL136520.1-202ENST00000555494 763 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AL589863.1-201ENST00000595383 631 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AL445649.1-201ENST00000615941 691 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC073592.6-201ENST00000624271 415 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AL138960.2-201ENST00000625145 535 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LINC01613-201ENST00000561476 2780 ntBASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
CHMP4CQ96CF2 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 RNU6-697P-201ENST00000363348 107 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 RNU11-6P-201ENST00000391127 133 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC098592.2-201ENST00000413158 265 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 DHFRP2-201ENST00000414224 547 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 SDR42E1P3-201ENST00000438345 502 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AL691517.1-201ENST00000440833 1235 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 AC114728.1-201ENST00000488289 483 ntBASIC7.53□□□□□ -1.2
CHMP4CQ96CF2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 151.6 ms