Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 AC112198.2-201ENST00000426589 6996 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S1Q92572 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S1Q92572 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.18□□□□□ -1.58
AP3S1Q92572 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 SNRPG-201ENST00000272348 625 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 RNA5SP211-201ENST00000365516 117 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 TINAG-202ENST00000370864 692 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S1Q92572 RNU1-136P-201ENST00000384181 164 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S1Q92572 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 AL359633.1-201ENST00000421403 310 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 RPS7P14-201ENST00000426405 583 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC009784.1-201ENST00000426484 460 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S1Q92572 SOCS5P1-201ENST00000440415 949 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC092106.1-201ENST00000444291 373 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S1Q92572 AC092421.1-201ENST00000448148 418 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 RNU1-88P-201ENST00000459274 128 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S1Q92572 KHDC1P1-201ENST00000511053 508 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC105202.1-203ENST00000518024 875 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S1Q92572 IGHVII-51-2-201ENST00000519778 259 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S1Q92572 OR4A17P-201ENST00000526032 904 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 NPIPB14P-203ENST00000532298 987 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC078929.1-201ENST00000547679 502 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S1Q92572 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.18□□□□□ -1.58
AP3S1Q92572 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
AP3S1Q92572 RN7SL475P-201ENST00000583379 298 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.18□□□□□ -1.58
AP3S1Q92572 CARSP1-201ENST00000603171 889 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AC008833.1-201ENST00000611633 691 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 uc_338.26-201ENST00000612659 160 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 AC244196.5-201ENST00000617347 406 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AP3S1Q92572 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 AC073488.6-201ENST00000632293 754 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.18□□□□□ -1.58
AP3S1Q92572 AC027559.1-201ENST00000636288 271 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.18□□□□□ -1.58
AP3S1Q92572 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AP3S1Q92572 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.18□□□□□ -1.58
AP3S1Q92572 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AP3S1Q92572 TUBBP10-201ENST00000427668 1301 ntBASIC5.18□□□□□ -1.58
AP3S1Q92572 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.18□□□□□ -1.58
AP3S1Q92572 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AP3S1Q92572 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP3S1Q92572 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP3S1Q92572 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
AP3S1Q92572 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP3S1Q92572 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
AP3S1Q92572 OR5P3-201ENST00000328375 936 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
AP3S1Q92572 RNU1-84P-201ENST00000365447 164 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 RNA5SP91-201ENST00000390902 119 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 SSR1P1-201ENST00000407630 814 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AL133482.1-201ENST00000415988 498 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 RPS7P8-201ENST00000418311 581 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.17□□□□□ -1.58
AP3S1Q92572 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AC009303.1-201ENST00000426307 352 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 AC009362.1-201ENST00000427253 406 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 RPL12P18-201ENST00000437175 325 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AL121578.2-201ENST00000448797 447 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 MEMO1P4-201ENST00000453590 386 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 SNORD125-201ENST00000459538 96 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 RPL5P3-201ENST00000493817 889 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 EIF3LP3-201ENST00000495197 822 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.17□□□□□ -1.58
AP3S1Q92572 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC5.17□□□□□ -1.58
AP3S1Q92572 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
AP3S1Q92572 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.17□□□□□ -1.58
AP3S1Q92572 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AC133552.4-201ENST00000576103 676 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 AC011193.2-201ENST00000582638 367 ntBASIC5.17□□□□□ -1.58
AP3S1Q92572 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC5.17□□□□□ -1.58
AP3S1Q92572 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.17□□□□□ -1.58
AP3S1Q92572 TATDN1-220ENST00000605953 726 ntTSL 2 BASIC5.17□□□□□ -1.58
AP3S1Q92572 AL591167.1-201ENST00000607321 456 ntBASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms