Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RPS20-201ENST00000009589 626 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 B3GALT1-201ENST00000392690 5094 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 CDY1B-202ENST00000382407 2227 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 ADA2-202ENST00000330232 3195 ntTSL 2 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC7.55□□□□□ -1.2
DEPDC4Q8N2C3 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RPL4P3-201ENST00000428881 1311 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 NF1P2-201ENST00000556855 2505 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 FLJ42393-201ENST00000623801 2270 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MIR17HG-202ENST00000581816 2032 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LIMCH1-201ENST00000313860 6165 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 PARP1P1-201ENST00000413631 3026 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 FAM32BP-201ENST00000344033 333 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 FCAR-202ENST00000353758 537 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RNY4P14-201ENST00000363656 96 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RNU5E-5P-201ENST00000365379 116 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 XGY1-201ENST00000381172 446 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RAN-201ENST00000392367 780 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RPL23AP29-201ENST00000397284 453 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 VIM2P-201ENST00000402383 1294 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MTCYBP36-201ENST00000404146 440 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AL355375.1-201ENST00000405686 392 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 FCF1P10-201ENST00000407590 479 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 SYNE1-AS1-201ENST00000412161 553 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RPL36P1-201ENST00000419720 225 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RPS27AP14-201ENST00000422868 454 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC007742.1-201ENST00000425789 329 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RPSAP53-201ENST00000433498 862 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MTND4LP10-201ENST00000435146 291 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 TMEM127-203ENST00000435268 582 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LINC00444-201ENST00000435617 215 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 ELOCP26-201ENST00000436067 329 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 GDI2P2-201ENST00000445131 608 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 FAR2P3-205ENST00000447059 604 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 PET100-201ENST00000456958 219 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC098583.1-201ENST00000480875 255 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC099521.1-201ENST00000482557 334 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 HMGN2P25-201ENST00000486956 268 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 RN7SL569P-201ENST00000494652 288 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 PTGES3P3-201ENST00000511479 482 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MTCYBP43-201ENST00000513621 740 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 GLYCAM1-201ENST00000546596 285 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MED31-202ENST00000574128 619 ntTSL 3 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC090774.2-201ENST00000584708 322 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC060766.2-201ENST00000588235 334 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AL021878.2-201ENST00000602718 399 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC103710.1-201ENST00000610003 901 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 MIR6762-201ENST00000613340 86 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 pRNA.12-201ENST00000614353 90 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 pRNA.3-201ENST00000615048 90 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AL158209.2-201ENST00000619266 216 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 CU638689.2-201ENST00000623809 818 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 LINC01358-208ENST00000634569 1030 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 OR7A2P-202ENST00000641312 1219 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AL022334.1-201ENST00000417397 1726 ntBASIC7.54□□□□□ -1.2
DEPDC4Q8N2C3 AC015689.2-201ENST00000528172 1738 ntBASIC7.54□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 120.6 ms