Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC104164.1-201ENST00000460282 590 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC023245.1-201ENST00000468501 517 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC124945.1-201ENST00000485133 188 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL035690.1-201ENST00000490892 383 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 CCDC11P1-201ENST00000503137 1162 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 OR5H7P-201ENST00000514084 930 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 SCARNA18.1-201ENST00000516330 83 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC005244.1-201ENST00000582566 339 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL021918.2-201ENST00000613415 194 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL031658.2-201ENST00000616850 651 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC005899.7-201ENST00000618199 588 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AL359742.1-201ENST00000622497 540 ntBASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
C9orf40Q8IXQ3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AF287957.1-201ENST00000607368 1595 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC021876.1-201ENST00000425959 359 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 RPS7P3-201ENST00000443360 580 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL162739.1-201ENST00000450606 307 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL359839.1-201ENST00000451975 1160 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 SDC4P-201ENST00000453285 601 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 GEMIN2P1-201ENST00000454246 752 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 RN7SL193P-201ENST00000491708 276 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 Y_RNA.667-201ENST00000516212 107 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC090888.3-201ENST00000558917 509 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC005726.4-201ENST00000582858 458 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL138895.2-201ENST00000603019 178 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC067773.1-201ENST00000603284 1094 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AL136097.3-201ENST00000611097 505 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 MIR6778-201ENST00000617912 73 ntBASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
C9orf40Q8IXQ3 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 HSPD1P8-201ENST00000400121 1658 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 IMMTP1-201ENST00000435590 2219 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 MARK2P4-201ENST00000503381 2380 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 SELENOWP1-201ENST00000322792 252 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 RN7SKP77-201ENST00000363261 353 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 SUGT1P2-201ENST00000379452 992 ntBASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
C9orf40Q8IXQ3 KIF4CP-201ENST00000422742 1279 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms