Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC011592.1-201ENST00000624647 3634 ntBASIC7.65□□□□□ -1.19
NPAS4Q8IUM7 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.19
NPAS4Q8IUM7 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 CAP1-206ENST00000372805 2217 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 HNRNPA1P54-201ENST00000411857 9714 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LIN7A-204ENST00000552864 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 DNAJC6-201ENST00000263441 5916 ntAPPRIS ALT2 TSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 KLHL5-204ENST00000504108 2690 ntTSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RNU6-532P-201ENST00000384318 107 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LYPLA1P3-201ENST00000402650 695 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RPS27AP11-201ENST00000402798 447 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL079342.2-201ENST00000403367 482 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL034374.1-201ENST00000406329 351 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 IGKV1OR2-3-201ENST00000411475 288 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 TCEA1P4-201ENST00000415066 844 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 OR5AW1P-201ENST00000426334 1006 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 GAPDHP19-201ENST00000431768 1005 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 MTCO1P52-201ENST00000433928 531 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LINC00570-203ENST00000437795 490 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 COX7BP2-201ENST00000437976 242 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 MTCO3P16-201ENST00000454456 754 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RPS26P11-201ENST00000463445 348 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC026336.1-201ENST00000466577 351 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RPS26P6-201ENST00000475156 348 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RPL23AP8-201ENST00000479812 475 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RN7SL569P-201ENST00000494652 288 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC107401.1-201ENST00000503426 685 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC093878.1-201ENST00000515630 432 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC124293.1-201ENST00000530034 493 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 OR5BK1P-201ENST00000550421 823 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 NBEAP1-201ENST00000554452 979 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 UBE2CP1-201ENST00000557130 554 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 SS18L2P2-201ENST00000583960 235 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RPL7AP69-201ENST00000595306 806 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL355333.1-201ENST00000605632 279 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC135507.1-201ENST00000607214 561 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC007671.2-201ENST00000637344 619 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 RETREG1-202ENST00000399793 3145 ntTSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AL121950.1-201ENST00000624993 2077 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 CASR-205ENST00000639785 10047 ntAPPRIS P1 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC000367.1-201ENST00000452711 1766 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 AC018688.1-201ENST00000636528 1754 ntBASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 EYA1-202ENST00000340726 4326 ntAPPRIS P3 TSL 1 (best) BASIC7.64□□□□□ -1.19
NPAS4Q8IUM7 MYO1B-201ENST00000304164 4933 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 PIAS1-201ENST00000249636 8115 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AQP4-AS1-201ENST00000568797 3119 ntTSL 2 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC102941.1-201ENST00000567616 1537 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AL512662.1-201ENST00000624850 2251 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC016582.1-202ENST00000636341 2982 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC006042.3-201ENST00000454684 1469 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 GTF2H2B-203ENST00000508065 1432 ntBASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.63□□□□□ -1.19
NPAS4Q8IUM7 AC105749.1-201ENST00000631338 2008 ntBASIC7.63□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms