Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 AL022237.1-201ENST00000446663 358 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC092421.1-201ENST00000448148 418 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC103563.5-201ENST00000455643 364 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 MED28P7-201ENST00000456611 530 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AL445687.2-201ENST00000458156 728 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC079193.1-201ENST00000460497 588 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC078788.2-201ENST00000462300 382 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC126615.1-201ENST00000470084 630 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 RPL5P3-201ENST00000493817 889 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC011405.1-203ENST00000510110 1067 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC010442.1-201ENST00000515583 816 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC083967.1-201ENST00000522354 515 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 CCL2-202ENST00000580907 736 ntTSL 2 BASIC4.28□□□□□ -1.72
CKS1BP61024 MIR5682-201ENST00000584864 76 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 AC133552.5-201ENST00000604266 540 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC069234.4-201ENST00000621276 412 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.28□□□□□ -1.72
CKS1BP61024 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS1BP61024 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS1BP61024 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CKS1BP61024 EEF1A1P16-201ENST00000325349 1414 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC125238.2-201ENST00000430003 1440 ntBASIC4.28□□□□□ -1.72
CKS1BP61024 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC4.28□□□□□ -1.72
CKS1BP61024 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CKS1BP61024 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 RGS2-201ENST00000235382 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC092701.1-201ENST00000623627 1551 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CKS1BP61024 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 ZNF652P1-201ENST00000442420 1309 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 PSMC1P4-201ENST00000515236 1327 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS1BP61024 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CKS1BP61024 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CKS1BP61024 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS1BP61024 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 AL121977.1-201ENST00000401636 979 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 U3.43-201ENST00000410734 213 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 CYP4F30P-202ENST00000420048 405 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 CR391992.1-201ENST00000438601 394 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC4.27□□□□□ -1.73
CKS1BP61024 PCMTD1P3-201ENST00000451824 472 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 AL133232.1-201ENST00000458293 483 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 RPL23AP64-201ENST00000469465 435 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 TUBBP11-201ENST00000472255 252 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 ST13P12-201ENST00000508958 1094 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 HMGB1P19-201ENST00000517578 577 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.27□□□□□ -1.73
CKS1BP61024 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS1BP61024 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS1BP61024 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC4.27□□□□□ -1.73
CKS1BP61024 SETP17-201ENST00000534163 817 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.27□□□□□ -1.73
CKS1BP61024 MYL6-213ENST00000549017 502 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.27□□□□□ -1.73
CKS1BP61024 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC011193.2-201ENST00000582638 367 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.27□□□□□ -1.73
CKS1BP61024 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 AC091133.5-201ENST00000603088 301 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 AL008729.2-201ENST00000606393 473 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 TP53TG1_2.1-201ENST00000611226 182 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 MIR6085-201ENST00000618314 110 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 AC127071.2-201ENST00000623293 527 ntBASIC4.27□□□□□ -1.73
CKS1BP61024 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.27□□□□□ -1.73
CKS1BP61024 OR7E91P-202ENST00000642062 1198 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms