Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AL121977.1-201ENST00000401636 979 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.48□□□□□ -1.37
CASP4P49662 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.48□□□□□ -1.37
CASP4P49662 KIF4CP-201ENST00000422742 1279 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AC099677.3-201ENST00000427081 395 ntBASIC6.48□□□□□ -1.37
CASP4P49662 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.48□□□□□ -1.37
CASP4P49662 AL445928.1-201ENST00000435545 222 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AC068228.1-201ENST00000461723 211 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AL603882.1-201ENST00000463059 681 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.48□□□□□ -1.37
CASP4P49662 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.48□□□□□ -1.37
CASP4P49662 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.48□□□□□ -1.37
CASP4P49662 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.48□□□□□ -1.37
CASP4P49662 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC6.48□□□□□ -1.37
CASP4P49662 AC107958.1-201ENST00000556576 290 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.48□□□□□ -1.37
CASP4P49662 AC090826.1-203ENST00000569235 490 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC6.48□□□□□ -1.37
CASP4P49662 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.48□□□□□ -1.37
CASP4P49662 AC108673.3-201ENST00000609183 335 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AC016590.3-201ENST00000611171 753 ntBASIC6.48□□□□□ -1.37
CASP4P49662 AP001052.1-201ENST00000626421 99 ntBASIC6.48□□□□□ -1.37
CASP4P49662 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.48□□□□□ -1.37
CASP4P49662 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CASP4P49662 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
CASP4P49662 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 AC012254.3-201ENST00000591183 2117 ntBASIC6.47□□□□□ -1.37
CASP4P49662 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 AL592430.1-202ENST00000414383 1546 ntTSL 3 BASIC6.47□□□□□ -1.37
CASP4P49662 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.47□□□□□ -1.37
CASP4P49662 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 SELENOWP1-201ENST00000322792 252 ntBASIC6.47□□□□□ -1.37
CASP4P49662 TMSB4XP2-201ENST00000335179 210 ntBASIC6.47□□□□□ -1.37
CASP4P49662 SNORD1C-201ENST00000363315 78 ntBASIC6.47□□□□□ -1.37
CASP4P49662 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.47□□□□□ -1.37
CASP4P49662 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.47□□□□□ -1.37
CASP4P49662 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC6.47□□□□□ -1.37
CASP4P49662 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 AL663074.2-201ENST00000440621 479 ntBASIC6.47□□□□□ -1.37
CASP4P49662 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 AC005077.1-201ENST00000449226 375 ntBASIC6.47□□□□□ -1.37
CASP4P49662 PPIAP27-201ENST00000453800 265 ntBASIC6.47□□□□□ -1.37
CASP4P49662 AC023245.1-201ENST00000468501 517 ntBASIC6.47□□□□□ -1.37
CASP4P49662 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.47□□□□□ -1.37
CASP4P49662 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.47□□□□□ -1.37
CASP4P49662 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.47□□□□□ -1.37
CASP4P49662 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.47□□□□□ -1.37
CASP4P49662 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.47□□□□□ -1.37
CASP4P49662 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.47□□□□□ -1.37
CASP4P49662 AC005363.1-201ENST00000530779 351 ntBASIC6.47□□□□□ -1.37
CASP4P49662 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.47□□□□□ -1.37
CASP4P49662 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.47□□□□□ -1.37
CASP4P49662 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.47□□□□□ -1.37
CASP4P49662 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.47□□□□□ -1.37
CASP4P49662 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC6.47□□□□□ -1.37
CASP4P49662 MIR6071-201ENST00000616741 78 ntBASIC6.47□□□□□ -1.37
CASP4P49662 MAPK10-350ENST00000641777 965 ntBASIC6.47□□□□□ -1.37
CASP4P49662 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.47□□□□□ -1.37
CASP4P49662 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
CASP4P49662 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC6.47□□□□□ -1.37
CASP4P49662 AF287957.1-201ENST00000607368 1595 ntBASIC6.47□□□□□ -1.37
CASP4P49662 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.47□□□□□ -1.37
CASP4P49662 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CASP4P49662 OFD1P17-201ENST00000437639 3018 ntBASIC6.47□□□□□ -1.37
CASP4P49662 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
CASP4P49662 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.37
CASP4P49662 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.46□□□□□ -1.37
CASP4P49662 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.46□□□□□ -1.38
CASP4P49662 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CASP4P49662 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
CASP4P49662 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
CASP4P49662 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.46□□□□□ -1.38
CASP4P49662 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.46□□□□□ -1.38
CASP4P49662 CXADRP1-201ENST00000398098 1095 ntBASIC6.46□□□□□ -1.38
CASP4P49662 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.46□□□□□ -1.38
CASP4P49662 RPS4XP5-201ENST00000419038 768 ntBASIC6.46□□□□□ -1.38
CASP4P49662 AC069154.1-201ENST00000432914 542 ntBASIC6.46□□□□□ -1.38
CASP4P49662 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC6.46□□□□□ -1.38
CASP4P49662 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.46□□□□□ -1.38
CASP4P49662 AL390879.1-201ENST00000439143 386 ntBASIC6.46□□□□□ -1.38
CASP4P49662 BMS1P10-201ENST00000443754 1120 ntBASIC6.46□□□□□ -1.38
CASP4P49662 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.46□□□□□ -1.38
CASP4P49662 PFN1P6-201ENST00000476786 399 ntBASIC6.46□□□□□ -1.38
CASP4P49662 MIR2117-201ENST00000516780 80 ntBASIC6.46□□□□□ -1.38
CASP4P49662 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.46□□□□□ -1.38
CASP4P49662 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.46□□□□□ -1.38
CASP4P49662 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.46□□□□□ -1.38
CASP4P49662 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.46□□□□□ -1.38
CASP4P49662 AC027369.2-201ENST00000528030 440 ntBASIC6.46□□□□□ -1.38
CASP4P49662 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms