Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.96□□□□□ -1.14
PDE6BP35913 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PDE6BP35913 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
PDE6BP35913 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC7.96□□□□□ -1.14
PDE6BP35913 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC7.96□□□□□ -1.14
PDE6BP35913 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PDE6BP35913 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
PDE6BP35913 MROH3P-201ENST00000435735 2676 ntBASIC7.96□□□□□ -1.14
PDE6BP35913 USP40-202ENST00000409945 1946 ntTSL 2 BASIC7.95□□□□□ -1.14
PDE6BP35913 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC7.95□□□□□ -1.14
PDE6BP35913 PPARGC1A-217ENST00000613098 3210 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC7.95□□□□□ -1.14
PDE6BP35913 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PDE6BP35913 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC7.95□□□□□ -1.14
PDE6BP35913 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 AL355306.2-201ENST00000635570 1542 ntTSL 5 BASIC7.95□□□□□ -1.14
PDE6BP35913 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PDE6BP35913 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PDE6BP35913 RNU4-23P-201ENST00000362839 140 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 RNA5SP346-201ENST00000363541 121 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 RPL5P5-201ENST00000392009 893 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 NPM1P36-201ENST00000415681 835 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 TRGV7-201ENST00000427089 353 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 RPL5P9-201ENST00000448118 886 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 CFL1P4-201ENST00000451536 498 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 AC096736.3-201ENST00000510753 993 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 RNU6-1334P-201ENST00000516032 105 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 AC023538.1-201ENST00000534576 736 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 HTR2A-203ENST00000543956 4689 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC7.95□□□□□ -1.14
PDE6BP35913 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.95□□□□□ -1.14
PDE6BP35913 AC133794.1-201ENST00000602731 914 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 AC073333.2-201ENST00000603589 769 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 ELOCP35-201ENST00000604289 336 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 Z99289.3-201ENST00000605586 594 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 PPATP2-201ENST00000605635 508 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 AC025171.4-201ENST00000607250 1047 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC7.95□□□□□ -1.14
PDE6BP35913 AC245014.3-201ENST00000618589 347 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 AL354718.1-201ENST00000619764 589 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
PDE6BP35913 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC7.95□□□□□ -1.14
PDE6BP35913 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC7.95□□□□□ -1.14
PDE6BP35913 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.95□□□□□ -1.14
PDE6BP35913 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.95□□□□□ -1.14
PDE6BP35913 AC092821.3-202ENST00000641304 2767 ntBASIC7.95□□□□□ -1.14
PDE6BP35913 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC7.95□□□□□ -1.14
PDE6BP35913 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.95□□□□□ -1.14
PDE6BP35913 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 PMFBP1-202ENST00000355636 3501 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
PDE6BP35913 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
PDE6BP35913 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC7.94□□□□□ -1.14
PDE6BP35913 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDE6BP35913 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC7.94□□□□□ -1.14
PDE6BP35913 AL391262.1-201ENST00000556558 1992 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDE6BP35913 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC7.94□□□□□ -1.14
PDE6BP35913 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
PDE6BP35913 MTND4LP21-201ENST00000415303 295 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC7.94□□□□□ -1.14
PDE6BP35913 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC7.94□□□□□ -1.14
PDE6BP35913 SEPT14P12-201ENST00000442280 560 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 ELOCP13-201ENST00000443934 329 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 DEFA11P-201ENST00000446470 261 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.94□□□□□ -1.14
PDE6BP35913 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7.94□□□□□ -1.14
PDE6BP35913 CST12P-201ENST00000457644 362 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC7.94□□□□□ -1.14
PDE6BP35913 RPL23AP64-201ENST00000469465 435 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 RN7SL326P-201ENST00000477493 296 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AC117395.1-201ENST00000487390 403 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC7.94□□□□□ -1.14
PDE6BP35913 MTCO3P28-201ENST00000513351 515 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC7.94□□□□□ -1.14
PDE6BP35913 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.94□□□□□ -1.14
PDE6BP35913 AC068305.2-201ENST00000550567 1205 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 RPA2P1-201ENST00000556557 721 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.94□□□□□ -1.14
PDE6BP35913 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.94□□□□□ -1.14
PDE6BP35913 AC005332.4-201ENST00000592752 579 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC7.94□□□□□ -1.14
PDE6BP35913 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC7.94□□□□□ -1.14
PDE6BP35913 AC068768.2-201ENST00000602352 343 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.94□□□□□ -1.14
PDE6BP35913 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC7.94□□□□□ -1.14
PDE6BP35913 AP001823.1-201ENST00000604056 1003 ntBASIC7.94□□□□□ -1.14
PDE6BP35913 AC087752.4-201ENST00000605911 462 ntBASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms