Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 MIR130B-202ENST00000385018 82 ntBASIC5.52□□□□□ -1.53
SHC1P29353 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHC1P29353 AL096800.1-201ENST00000405326 893 ntBASIC5.52□□□□□ -1.53
SHC1P29353 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.52□□□□□ -1.53
SHC1P29353 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 RPL12P16-201ENST00000431098 498 ntBASIC5.52□□□□□ -1.53
SHC1P29353 AC007679.3-201ENST00000434035 414 ntBASIC5.52□□□□□ -1.53
SHC1P29353 PNKDP1-201ENST00000435914 430 ntBASIC5.52□□□□□ -1.53
SHC1P29353 AL353662.1-201ENST00000439099 327 ntBASIC5.52□□□□□ -1.53
SHC1P29353 ZNF619P1-201ENST00000446539 752 ntBASIC5.52□□□□□ -1.53
SHC1P29353 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC5.52□□□□□ -1.53
SHC1P29353 OR52I1-201ENST00000450052 1050 ntBASIC5.52□□□□□ -1.53
SHC1P29353 CTSLP6-201ENST00000458273 1002 ntBASIC5.52□□□□□ -1.53
SHC1P29353 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.52□□□□□ -1.53
SHC1P29353 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.52□□□□□ -1.53
SHC1P29353 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.52□□□□□ -1.53
SHC1P29353 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.52□□□□□ -1.53
SHC1P29353 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.52□□□□□ -1.53
SHC1P29353 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.52□□□□□ -1.53
SHC1P29353 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.52□□□□□ -1.53
SHC1P29353 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 BCAS2P1-201ENST00000528022 632 ntBASIC5.52□□□□□ -1.53
SHC1P29353 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.52□□□□□ -1.53
SHC1P29353 AC006512.2-201ENST00000543250 486 ntBASIC5.52□□□□□ -1.53
SHC1P29353 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.52□□□□□ -1.53
SHC1P29353 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.52□□□□□ -1.53
SHC1P29353 AC107958.1-201ENST00000556576 290 ntBASIC5.52□□□□□ -1.53
SHC1P29353 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.52□□□□□ -1.53
SHC1P29353 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.52□□□□□ -1.53
SHC1P29353 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 AC068768.2-201ENST00000602352 343 ntBASIC5.52□□□□□ -1.53
SHC1P29353 AC141002.1-201ENST00000607025 279 ntBASIC5.52□□□□□ -1.53
SHC1P29353 RN7SL261P-201ENST00000613441 282 ntBASIC5.52□□□□□ -1.53
SHC1P29353 MIR7109-201ENST00000613748 65 ntBASIC5.52□□□□□ -1.53
SHC1P29353 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHC1P29353 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
SHC1P29353 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.52□□□□□ -1.53
SHC1P29353 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SHC1P29353 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 AC018628.1-201ENST00000624147 3819 ntBASIC5.52□□□□□ -1.53
SHC1P29353 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
SHC1P29353 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
SHC1P29353 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 KYNUP3-201ENST00000574386 1341 ntBASIC5.51□□□□□ -1.53
SHC1P29353 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.51□□□□□ -1.53
SHC1P29353 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.51□□□□□ -1.53
SHC1P29353 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.51□□□□□ -1.53
SHC1P29353 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 RNU1-134P-201ENST00000362935 165 ntBASIC5.51□□□□□ -1.53
SHC1P29353 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.51□□□□□ -1.53
SHC1P29353 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.51□□□□□ -1.53
SHC1P29353 SNORA51.9-201ENST00000384295 124 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AL121977.1-201ENST00000401636 979 ntBASIC5.51□□□□□ -1.53
SHC1P29353 RNA5SP156-201ENST00000410250 110 ntBASIC5.51□□□□□ -1.53
SHC1P29353 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 AC130360.1-201ENST00000425489 1117 ntBASIC5.51□□□□□ -1.53
SHC1P29353 IGLV3-4-201ENST00000432300 244 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AC122718.2-201ENST00000505325 591 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.51□□□□□ -1.53
SHC1P29353 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.51□□□□□ -1.53
SHC1P29353 AC130365.2-201ENST00000525882 1201 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.51□□□□□ -1.53
SHC1P29353 AC002519.2-203ENST00000567043 837 ntBASIC5.51□□□□□ -1.53
SHC1P29353 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SHC1P29353 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.51□□□□□ -1.53
SHC1P29353 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.51□□□□□ -1.53
SHC1P29353 AL034374.2-201ENST00000605281 548 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AC004890.3-201ENST00000605566 1095 ntBASIC5.51□□□□□ -1.53
SHC1P29353 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC5.51□□□□□ -1.53
SHC1P29353 AC073389.3-201ENST00000609434 935 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AC092681.3-201ENST00000609463 678 ntBASIC5.51□□□□□ -1.53
SHC1P29353 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC5.51□□□□□ -1.53
SHC1P29353 AC004801.6-201ENST00000616571 978 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AC073593.1-201ENST00000624500 411 ntBASIC5.51□□□□□ -1.53
SHC1P29353 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC5.51□□□□□ -1.53
SHC1P29353 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHC1P29353 PSG10P-201ENST00000501199 1500 ntBASIC5.51□□□□□ -1.53
SHC1P29353 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SHC1P29353 AC114876.1-201ENST00000490962 1366 ntBASIC5.51□□□□□ -1.53
SHC1P29353 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.51□□□□□ -1.53
SHC1P29353 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SHC1P29353 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
SHC1P29353 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.51□□□□□ -1.53
SHC1P29353 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.51□□□□□ -1.53
SHC1P29353 AL592429.1-201ENST00000403909 1473 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms