Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC130360.1-201ENST00000425489 1117 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CTSLP6-201ENST00000458273 1002 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 RN7SL254P-201ENST00000460609 284 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 HMGN1P17-201ENST00000513734 295 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC109466.1-215ENST00000519750 516 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC130365.2-201ENST00000525882 1201 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC021269.1-201ENST00000526860 705 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC004232.2-201ENST00000574245 821 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 MIR4701-201ENST00000583094 63 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AL109924.4-201ENST00000623089 670 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC087821.1-201ENST00000623639 567 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AL683826.1-201ENST00000624104 627 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 AL357140.4-201ENST00000636827 412 ntBASIC6.17□□□□□ -1.42
HLA-DPA1P20036 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HLA-DPA1P20036 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 SNORA21-201ENST00000362423 132 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 RBBP4P5-201ENST00000398583 1266 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AL121835.1-201ENST00000404250 354 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CDY17P-201ENST00000414121 1282 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 RPS15AP30-201ENST00000420976 390 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 RPL24P2-201ENST00000421023 475 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CDY8P-201ENST00000428380 1279 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 FGF12-202ENST00000430714 603 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC108479.1-201ENST00000431142 427 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 GAPDHP59-201ENST00000435908 267 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AL512593.1-201ENST00000444758 779 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CDY20P-201ENST00000447528 1279 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC093166.3-201ENST00000448785 303 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC002553.3-201ENST00000453002 341 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC104339.1-201ENST00000465478 348 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC008945.1-201ENST00000505144 499 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 MAST4-IT1-201ENST00000514241 658 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 RNU4-18P-201ENST00000516751 149 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC107958.1-201ENST00000556576 290 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 QTRT1P1-201ENST00000604344 1078 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 SNORA35B-201ENST00000607417 129 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC073389.3-201ENST00000609434 935 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.16□□□□□ -1.42
HLA-DPA1P20036 uc_338.31-201ENST00000615595 186 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 MIR6721-201ENST00000617181 87 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AL591926.1-201ENST00000620542 217 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 AC111152.1-202ENST00000635848 339 ntBASIC6.16□□□□□ -1.42
HLA-DPA1P20036 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms