Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ARSFP1-201ENST00000398758 477 ntBASIC4.96□□□□□ -1.62
CTSDP07339 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC4.96□□□□□ -1.62
CTSDP07339 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.96□□□□□ -1.62
CTSDP07339 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 GTF3AP6-201ENST00000432585 986 ntBASIC4.96□□□□□ -1.62
CTSDP07339 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 AL645939.3-201ENST00000435408 225 ntBASIC4.96□□□□□ -1.62
CTSDP07339 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 AC023271.1-201ENST00000445936 1090 ntBASIC4.96□□□□□ -1.62
CTSDP07339 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 AL603882.1-201ENST00000463059 681 ntBASIC4.96□□□□□ -1.62
CTSDP07339 RN7SL197P-201ENST00000466981 299 ntBASIC4.96□□□□□ -1.62
CTSDP07339 AC090602.1-201ENST00000469695 252 ntBASIC4.96□□□□□ -1.62
CTSDP07339 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC4.96□□□□□ -1.62
CTSDP07339 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.96□□□□□ -1.62
CTSDP07339 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC4.96□□□□□ -1.62
CTSDP07339 RN7SKP64-201ENST00000517206 328 ntBASIC4.96□□□□□ -1.62
CTSDP07339 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC4.96□□□□□ -1.62
CTSDP07339 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC4.96□□□□□ -1.62
CTSDP07339 BMS1P16-201ENST00000556075 1147 ntBASIC4.96□□□□□ -1.62
CTSDP07339 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CTSDP07339 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC4.96□□□□□ -1.62
CTSDP07339 uc_338.26-201ENST00000612659 160 ntBASIC4.96□□□□□ -1.62
CTSDP07339 AC022106.1-201ENST00000612834 766 ntBASIC4.96□□□□□ -1.62
CTSDP07339 MIR6503-201ENST00000622884 86 ntBASIC4.96□□□□□ -1.62
CTSDP07339 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC4.96□□□□□ -1.62
CTSDP07339 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CTSDP07339 AP000473.2-201ENST00000602659 1537 ntBASIC4.96□□□□□ -1.62
CTSDP07339 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 AC109446.4-201ENST00000623235 2755 ntBASIC4.96□□□□□ -1.62
CTSDP07339 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
CTSDP07339 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.96□□□□□ -1.62
CTSDP07339 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.96□□□□□ -1.62
CTSDP07339 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
CTSDP07339 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
CTSDP07339 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 AC090220.1-201ENST00000593078 1699 ntBASIC4.96□□□□□ -1.62
CTSDP07339 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CTSDP07339 AC022325.1-201ENST00000502748 2199 ntBASIC4.95□□□□□ -1.62
CTSDP07339 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTSDP07339 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
CTSDP07339 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.95□□□□□ -1.62
CTSDP07339 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CTSDP07339 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CTSDP07339 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC4.95□□□□□ -1.62
CTSDP07339 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTSDP07339 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTSDP07339 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CTSDP07339 OR10R3P-201ENST00000361688 942 ntBASIC4.95□□□□□ -1.62
CTSDP07339 RN7SKP185-201ENST00000362813 326 ntBASIC4.95□□□□□ -1.62
CTSDP07339 RNA5SP346-201ENST00000363541 121 ntBASIC4.95□□□□□ -1.62
CTSDP07339 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CTSDP07339 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.95□□□□□ -1.62
CTSDP07339 REREP1Y-201ENST00000422655 198 ntBASIC4.95□□□□□ -1.62
CTSDP07339 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.95□□□□□ -1.62
CTSDP07339 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.95□□□□□ -1.62
CTSDP07339 AC242426.1-201ENST00000435270 960 ntBASIC4.95□□□□□ -1.62
CTSDP07339 MTND2P40-201ENST00000436718 841 ntBASIC4.95□□□□□ -1.62
CTSDP07339 RPEP4-201ENST00000437636 602 ntBASIC4.95□□□□□ -1.62
CTSDP07339 AC096775.1-201ENST00000437724 448 ntBASIC4.95□□□□□ -1.62
CTSDP07339 REREP2Y-201ENST00000439103 200 ntBASIC4.95□□□□□ -1.62
CTSDP07339 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.95□□□□□ -1.62
CTSDP07339 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.95□□□□□ -1.62
CTSDP07339 POU5F1P5-201ENST00000445059 658 ntBASIC4.95□□□□□ -1.62
CTSDP07339 HIGD1AP16-201ENST00000450986 258 ntBASIC4.95□□□□□ -1.62
CTSDP07339 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CTSDP07339 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.95□□□□□ -1.62
CTSDP07339 AC084851.2-201ENST00000530377 364 ntBASIC4.95□□□□□ -1.62
CTSDP07339 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.95□□□□□ -1.62
CTSDP07339 OR9G2P-201ENST00000533326 880 ntBASIC4.95□□□□□ -1.62
CTSDP07339 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC4.95□□□□□ -1.62
CTSDP07339 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.95□□□□□ -1.62
CTSDP07339 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.95□□□□□ -1.62
CTSDP07339 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.95□□□□□ -1.62
CTSDP07339 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC4.95□□□□□ -1.62
CTSDP07339 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC4.95□□□□□ -1.62
CTSDP07339 RN7SL66P-201ENST00000582099 264 ntBASIC4.95□□□□□ -1.62
CTSDP07339 AC026898.1-201ENST00000586404 571 ntBASIC4.95□□□□□ -1.62
CTSDP07339 AL022394.1-201ENST00000606979 292 ntBASIC4.95□□□□□ -1.62
CTSDP07339 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC4.95□□□□□ -1.62
CTSDP07339 OXSM-209ENST00000626005 309 ntTSL 3 BASIC4.95□□□□□ -1.62
CTSDP07339 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CTSDP07339 FANCD2P2-201ENST00000437591 1400 ntBASIC4.95□□□□□ -1.62
CTSDP07339 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms