Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
RB1P06400 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RB1P06400 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 AC093155.2-201ENST00000420734 937 ntBASIC6.57□□□□□ -1.36
RB1P06400 TRGV7-201ENST00000427089 353 ntBASIC6.57□□□□□ -1.36
RB1P06400 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.57□□□□□ -1.36
RB1P06400 AL445466.1-201ENST00000448432 357 ntBASIC6.57□□□□□ -1.36
RB1P06400 VN1R38P-201ENST00000450265 887 ntBASIC6.57□□□□□ -1.36
RB1P06400 GEMIN2P1-201ENST00000454246 752 ntBASIC6.57□□□□□ -1.36
RB1P06400 RNA5SP116-201ENST00000516132 98 ntBASIC6.57□□□□□ -1.36
RB1P06400 PCNAP4-201ENST00000532690 730 ntBASIC6.57□□□□□ -1.36
RB1P06400 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.57□□□□□ -1.36
RB1P06400 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.57□□□□□ -1.36
RB1P06400 AC009120.3-201ENST00000563335 499 ntBASIC6.57□□□□□ -1.36
RB1P06400 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.57□□□□□ -1.36
RB1P06400 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 MIR4776-2-201ENST00000580204 80 ntBASIC6.57□□□□□ -1.36
RB1P06400 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
RB1P06400 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.57□□□□□ -1.36
RB1P06400 BX284613.1-201ENST00000452221 1641 ntBASIC6.57□□□□□ -1.36
RB1P06400 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.57□□□□□ -1.36
RB1P06400 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RB1P06400 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.57□□□□□ -1.36
RB1P06400 AC007342.9-201ENST00000623877 1385 ntBASIC6.57□□□□□ -1.36
RB1P06400 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.56□□□□□ -1.36
RB1P06400 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.56□□□□□ -1.36
RB1P06400 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 AC007359.1-202ENST00000419158 2939 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.56□□□□□ -1.36
RB1P06400 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 RN7SKP160-201ENST00000363804 340 ntBASIC6.56□□□□□ -1.36
RB1P06400 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 AL050305.1-201ENST00000399993 1230 ntBASIC6.56□□□□□ -1.36
RB1P06400 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 RPL36P18-201ENST00000419316 318 ntBASIC6.56□□□□□ -1.36
RB1P06400 BX119904.3-201ENST00000428194 957 ntBASIC6.56□□□□□ -1.36
RB1P06400 BX323845.3-201ENST00000428215 527 ntBASIC6.56□□□□□ -1.36
RB1P06400 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC6.56□□□□□ -1.36
RB1P06400 MGAT2P1-201ENST00000449718 797 ntBASIC6.56□□□□□ -1.36
RB1P06400 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.56□□□□□ -1.36
RB1P06400 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 AC112184.1-201ENST00000505179 312 ntBASIC6.56□□□□□ -1.36
RB1P06400 RN7SKP98-201ENST00000517070 156 ntBASIC6.56□□□□□ -1.36
RB1P06400 IGLV2-28-201ENST00000520681 304 ntBASIC6.56□□□□□ -1.36
RB1P06400 IGKV2-18-201ENST00000522607 343 ntBASIC6.56□□□□□ -1.36
RB1P06400 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 AC090651.1-201ENST00000567865 634 ntBASIC6.56□□□□□ -1.36
RB1P06400 MIR5095-201ENST00000578844 88 ntBASIC6.56□□□□□ -1.36
RB1P06400 MIR1273E-201ENST00000581165 102 ntBASIC6.56□□□□□ -1.36
RB1P06400 AL953862.2-201ENST00000603089 820 ntBASIC6.56□□□□□ -1.36
RB1P06400 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.56□□□□□ -1.36
RB1P06400 AP000864.1-201ENST00000609424 650 ntBASIC6.56□□□□□ -1.36
RB1P06400 AC006924.1-201ENST00000610750 559 ntBASIC6.56□□□□□ -1.36
RB1P06400 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC6.56□□□□□ -1.36
RB1P06400 AL445647.2-201ENST00000615170 130 ntBASIC6.56□□□□□ -1.36
RB1P06400 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 MIR193BHG-214ENST00000641765 509 ntBASIC6.56□□□□□ -1.36
RB1P06400 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.56□□□□□ -1.36
RB1P06400 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
RB1P06400 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RB1P06400 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms