Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL136455.1-201ENST00000441083 1240 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AL512605.1-202ENST00000441919 381 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC009237.1-201ENST00000442127 744 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AL359955.2-201ENST00000445380 353 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC011476.1-201ENST00000466725 307 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-DOAP06340 PSMA2P2-201ENST00000504319 686 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 MTATP6P1-201ENST00000514057 681 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC012146.2-201ENST00000576545 416 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 RN7SL753P-201ENST00000581238 290 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 KATNBL1P1-201ENST00000605192 748 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 BNIP3P7-201ENST00000605641 516 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC017076.1-201ENST00000607613 578 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AL357562.1-201ENST00000624911 609 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC006927.4-201ENST00000639187 543 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC7.21□□□□□ -1.26
HLA-DOAP06340 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-DOAP06340 AC012254.3-201ENST00000591183 2117 ntBASIC7.21□□□□□ -1.26
HLA-DOAP06340 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-DOAP06340 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-DOAP06340 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.21□□□□□ -1.26
HLA-DOAP06340 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 ST7-203ENST00000393443 2360 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 MIPEPP2-201ENST00000422560 1819 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC119674.1-202ENST00000641333 1860 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AL391261.1-201ENST00000555712 1479 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 OR52B3P-201ENST00000314715 928 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 SNORA17A-201ENST00000391185 133 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AL096711.1-201ENST00000404780 554 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AL096800.1-201ENST00000405326 893 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 MIR1203-201ENST00000408812 85 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AL035660.1-201ENST00000422041 222 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 RPL31P15-201ENST00000449770 338 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 OR2AF1P-201ENST00000454899 889 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 NXT1P1-201ENST00000458481 316 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC018638.3-201ENST00000461273 132 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC073594.1-201ENST00000462065 364 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC083795.1-201ENST00000491760 320 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 KCTD9P4-201ENST00000526766 1166 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 MIR4776-2-201ENST00000580204 80 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 RNU4ATAC-201ENST00000580972 127 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC245128.3-201ENST00000594721 748 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC024589.2-201ENST00000605642 1294 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC026979.4-201ENST00000606555 645 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AL136131.3-201ENST00000607600 188 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 SNORA17.5-201ENST00000630429 132 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 AC003992.1-201ENST00000635364 557 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
HLA-DOAP06340 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.2□□□□□ -1.26
HLA-DOAP06340 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC7.2□□□□□ -1.26
HLA-DOAP06340 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-DOAP06340 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC7.19□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms