Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 NUTF2P7-201ENST00000453086 375 ntBASIC3.52□□□□□ -1.85
APOBP04114 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 SNORA70.11-201ENST00000515987 138 ntBASIC3.52□□□□□ -1.85
APOBP04114 SNORA70.13-201ENST00000516116 138 ntBASIC3.52□□□□□ -1.85
APOBP04114 IGHVIII-76-1-201ENST00000523776 286 ntBASIC3.52□□□□□ -1.85
APOBP04114 AC069307.1-201ENST00000602820 447 ntBASIC3.52□□□□□ -1.85
APOBP04114 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC3.52□□□□□ -1.85
APOBP04114 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 IGKV1OR22-5-201ENST00000458718 354 ntBASIC3.52□□□□□ -1.85
APOBP04114 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
APOBP04114 AC078878.1-201ENST00000539832 958 ntBASIC3.52□□□□□ -1.85
APOBP04114 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
APOBP04114 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 AC145423.1-201ENST00000605712 336 ntBASIC3.52□□□□□ -1.85
APOBP04114 APELA-202ENST00000507152 2602 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 OPCML-201ENST00000331898 6833 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 ZNF667-206ENST00000591790 5250 ntTSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC3.52□□□□□ -1.85
APOBP04114 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.52□□□□□ -1.85
APOBP04114 CTNND1-206ENST00000415361 5832 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 CTNND1-225ENST00000530094 5814 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 TP53BP1-210ENST00000450115 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC3.52□□□□□ -1.85
APOBP04114 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
APOBP04114 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 RNA5SP479-201ENST00000364858 117 ntBASIC3.51□□□□□ -1.85
APOBP04114 AC068538.1-201ENST00000376856 336 ntBASIC3.51□□□□□ -1.85
APOBP04114 AL389915.1-201ENST00000422463 466 ntBASIC3.51□□□□□ -1.85
APOBP04114 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 AL603882.1-201ENST00000463059 681 ntBASIC3.51□□□□□ -1.85
APOBP04114 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC3.51□□□□□ -1.85
APOBP04114 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 AC136624.4-201ENST00000573044 370 ntBASIC3.51□□□□□ -1.85
APOBP04114 AL162431.4-201ENST00000604674 411 ntBASIC3.51□□□□□ -1.85
APOBP04114 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC3.51□□□□□ -1.85
APOBP04114 OAS2-202ENST00000392583 4734 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
APOBP04114 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 ZEB2-239ENST00000637045 9091 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 LRRC37A17P-201ENST00000570311 4693 ntBASIC3.51□□□□□ -1.85
APOBP04114 DNAH14-211ENST00000445597 10524 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 ZNF264-201ENST00000263095 12163 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
APOBP04114 MIPEPP2-201ENST00000422560 1819 ntBASIC3.51□□□□□ -1.85
APOBP04114 BAZ2A-201ENST00000379441 8831 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 IMMTP1-201ENST00000435590 2219 ntBASIC3.51□□□□□ -1.85
APOBP04114 PCDH15-233ENST00000621708 5700 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 RNA5SP515-201ENST00000364570 118 ntBASIC3.51□□□□□ -1.85
APOBP04114 RNU1-43P-201ENST00000365052 165 ntBASIC3.51□□□□□ -1.85
APOBP04114 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 CAV1-204ENST00000393470 598 ntTSL 4 BASIC3.51□□□□□ -1.85
APOBP04114 AC096775.1-201ENST00000437724 448 ntBASIC3.51□□□□□ -1.85
APOBP04114 AC104634.1-201ENST00000452720 462 ntBASIC3.51□□□□□ -1.85
APOBP04114 ACA64.4-201ENST00000459070 127 ntBASIC3.51□□□□□ -1.85
APOBP04114 AC103987.1-201ENST00000473394 348 ntBASIC3.51□□□□□ -1.85
APOBP04114 SLC25A14P1-201ENST00000502867 901 ntBASIC3.51□□□□□ -1.85
APOBP04114 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC3.51□□□□□ -1.85
APOBP04114 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 MIR6780A-201ENST00000615089 68 ntBASIC3.51□□□□□ -1.85
APOBP04114 OR52H1-202ENST00000641796 1061 ntBASIC3.51□□□□□ -1.85
APOBP04114 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC3.51□□□□□ -1.85
APOBP04114 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 HSPA8P18-201ENST00000439846 1928 ntBASIC3.51□□□□□ -1.85
APOBP04114 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 NRBF2P2-201ENST00000413087 861 ntBASIC3.51□□□□□ -1.85
APOBP04114 RPSAP35-201ENST00000413753 818 ntBASIC3.51□□□□□ -1.85
APOBP04114 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
APOBP04114 NIFKP3-201ENST00000417799 865 ntBASIC3.51□□□□□ -1.85
APOBP04114 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC3.51□□□□□ -1.85
APOBP04114 RHOT1P3-201ENST00000436571 331 ntBASIC3.51□□□□□ -1.85
APOBP04114 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms