Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
HLA-DQA1P01909 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AL022322.2-201ENST00000624072 20397 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 HSPA8P14-201ENST00000552265 1805 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 SNORA43.1-201ENST00000364863 140 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 RNA5SP355-201ENST00000365317 135 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 EEF1GP6-201ENST00000402309 905 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 MRPL32P1-201ENST00000406301 247 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 MYL6P5-201ENST00000412707 459 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 TCEA1P3-201ENST00000443005 880 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 UBBP5-201ENST00000446970 266 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC009244.1-201ENST00000450566 258 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 RN7SKP198-201ENST00000459286 306 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 RPS4XP12-201ENST00000461747 709 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 RN7SL714P-201ENST00000487050 298 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 CCDC11P1-201ENST00000503137 1162 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC023161.1-201ENST00000549532 420 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC023389.2-201ENST00000580031 955 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 OR7E19P-202ENST00000589942 844 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AL137067.2-201ENST00000621202 131 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC027506.1-201ENST00000621395 198 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC127071.2-201ENST00000623293 527 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AL078595.2-201ENST00000605309 1780 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 AC005261.6-201ENST00000623072 1387 ntBASIC4.49□□□□□ -1.69
HLA-DQA1P01909 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.49□□□□□ -1.69
HLA-DQA1P01909 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL449283.1-201ENST00000602631 3403 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL353651.1-201ENST00000415629 355 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 MEAF6P1-201ENST00000416092 327 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 NAP1L4P3-201ENST00000432820 1147 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 MED28P4-201ENST00000433137 572 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 RPL12P18-201ENST00000437175 325 ntBASIC4.48□□□□□ -1.69
HLA-DQA1P01909 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.48□□□□□ -1.69
HLA-DQA1P01909 SEPHS1P4-201ENST00000446112 1176 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms