Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN9O95484 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN9O95484 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN9O95484 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN9O95484 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN9O95484 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN9O95484 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN9O95484 AL136455.1-201ENST00000441083 1240 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN9O95484 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN9O95484 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN9O95484 OSTCP1-201ENST00000455507 450 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 AC005165.2-201ENST00000466070 380 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 MAST4-IT1-201ENST00000514241 658 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 RNA5SP441-201ENST00000516809 88 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 AC021733.2-201ENST00000518830 497 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN9O95484 OR4A42P-201ENST00000531397 938 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN9O95484 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.78□□□□□ -1.48
CLDN9O95484 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.78□□□□□ -1.48
CLDN9O95484 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN9O95484 AC093524.1-201ENST00000564266 1094 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
CLDN9O95484 AC005899.5-201ENST00000584721 552 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN9O95484 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN9O95484 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.78□□□□□ -1.48
CLDN9O95484 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN9O95484 AC018690.1-201ENST00000608144 626 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 AL512652.1-201ENST00000619006 500 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 AC073488.6-201ENST00000632293 754 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
CLDN9O95484 RBMY1HP-201ENST00000382759 1389 ntBASIC5.78□□□□□ -1.48
CLDN9O95484 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.78□□□□□ -1.48
CLDN9O95484 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLDN9O95484 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.77□□□□□ -1.48
CLDN9O95484 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 AP002512.4-202ENST00000641599 4530 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CLDN9O95484 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN9O95484 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CLDN9O95484 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 RNA5SP211-201ENST00000365516 117 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 YWHAZP6-201ENST00000399764 738 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN9O95484 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 AC021876.1-201ENST00000425959 359 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AC099677.3-201ENST00000427081 395 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 AC108479.1-201ENST00000431142 427 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLDN9O95484 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 PPIAP7-201ENST00000454070 489 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 snoU13.29-201ENST00000459370 104 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 RN7SL254P-201ENST00000460609 284 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AL603882.1-201ENST00000463059 681 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 PFN1P6-201ENST00000476786 399 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN9O95484 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN9O95484 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN9O95484 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN9O95484 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN9O95484 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.77□□□□□ -1.49
CLDN9O95484 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 SNORA81.2-201ENST00000516868 170 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 OR7E158P-201ENST00000524483 910 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 AC110056.1-201ENST00000525759 911 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AP000620.1-201ENST00000527147 504 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.77□□□□□ -1.49
CLDN9O95484 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.77□□□□□ -1.49
CLDN9O95484 AC004232.2-201ENST00000574245 821 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 AL109924.4-201ENST00000623089 670 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AL357140.4-201ENST00000636827 412 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 AL359955.1-201ENST00000455242 3275 ntBASIC5.77□□□□□ -1.49
CLDN9O95484 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
CLDN9O95484 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
CLDN9O95484 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLDN9O95484 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.77□□□□□ -1.49
CLDN9O95484 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN9O95484 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN9O95484 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CLDN9O95484 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN9O95484 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.76□□□□□ -1.49
CLDN9O95484 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.76□□□□□ -1.49
CLDN9O95484 GNL2P1-201ENST00000451274 2190 ntBASIC5.76□□□□□ -1.49
CLDN9O95484 AC239868.2-201ENST00000564237 4527 ntBASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms