Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.06□□□□□ -1.44
RIPK2O43353 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.06□□□□□ -1.44
RIPK2O43353 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RIPK2O43353 CR382285.2-201ENST00000624662 1495 ntBASIC6.06□□□□□ -1.44
RIPK2O43353 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
RIPK2O43353 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
RIPK2O43353 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
RIPK2O43353 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.06□□□□□ -1.44
RIPK2O43353 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RIPK2O43353 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.06□□□□□ -1.44
RIPK2O43353 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
RIPK2O43353 AC022325.1-201ENST00000502748 2199 ntBASIC6.06□□□□□ -1.44
RIPK2O43353 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.05□□□□□ -1.44
RIPK2O43353 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC6.05□□□□□ -1.44
RIPK2O43353 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 AL161912.4-201ENST00000623889 2468 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 AC112255.1-201ENST00000624070 2493 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RIPK2O43353 EIF3EP1-201ENST00000433978 1316 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
RIPK2O43353 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 LINC02010-202ENST00000471638 1829 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 MIR133A2-201ENST00000347538 102 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 RNA5SP211-201ENST00000365516 117 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
RIPK2O43353 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.05□□□□□ -1.44
RIPK2O43353 AC006509.1-201ENST00000420788 634 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 OSTCP4-201ENST00000424397 449 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 AP003385.1-201ENST00000426387 893 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 AC094019.1-201ENST00000434678 472 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 OR3D1P-201ENST00000438288 955 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 CXCR2P1-202ENST00000443392 1074 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 RPS23P9-201ENST00000448848 438 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 AC009244.1-201ENST00000450566 258 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC6.05□□□□□ -1.44
RIPK2O43353 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.05□□□□□ -1.44
RIPK2O43353 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.05□□□□□ -1.44
RIPK2O43353 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.05□□□□□ -1.44
RIPK2O43353 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.05□□□□□ -1.44
RIPK2O43353 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 LINC00682-204ENST00000637677 931 ntTSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 CASC19-246ENST00000641625 1606 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.05□□□□□ -1.44
RIPK2O43353 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.05□□□□□ -1.44
RIPK2O43353 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 AC083837.1-201ENST00000565297 2994 ntBASIC6.05□□□□□ -1.44
RIPK2O43353 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RIPK2O43353 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RIPK2O43353 AC018717.1-201ENST00000457712 1505 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK2O43353 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK2O43353 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK2O43353 AC097063.1-201ENST00000426714 1797 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RIPK2O43353 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK2O43353 RN7SKP185-201ENST00000362813 326 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.04□□□□□ -1.44
RIPK2O43353 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RIPK2O43353 MRPL32P1-201ENST00000406301 247 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.04□□□□□ -1.44
RIPK2O43353 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK2O43353 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK2O43353 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RIPK2O43353 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK2O43353 MED28P3-201ENST00000444288 531 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RIPK2O43353 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK2O43353 REG1CP-206ENST00000447469 496 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 LINC01961-201ENST00000449954 745 ntTSL 5 BASIC6.04□□□□□ -1.44
RIPK2O43353 AL354872.1-201ENST00000456361 967 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 PFN1P6-201ENST00000476786 399 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 GLUD1P3-202ENST00000508551 200 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.04□□□□□ -1.44
RIPK2O43353 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK2O43353 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK2O43353 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RIPK2O43353 AC021269.1-201ENST00000526860 705 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 CHEK2P2-201ENST00000554701 672 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.04□□□□□ -1.44
RIPK2O43353 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.04□□□□□ -1.44
RIPK2O43353 RN7SL32P-201ENST00000580514 281 ntBASIC6.04□□□□□ -1.44
RIPK2O43353 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.04□□□□□ -1.44
RIPK2O43353 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 131.5 ms