Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 TCP11X3P-202ENST00000514289 1254 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC120193.1-204ENST00000519689 651 ntTSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AP005119.2-201ENST00000579735 1105 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC090616.1-201ENST00000583895 447 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 TAS2R6P-201ENST00000605022 826 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC006547.1-211ENST00000609191 828 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 LINC00226-202ENST00000618204 1052 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 MIR7159-201ENST00000620587 66 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 SNORA16A-202ENST00000628458 135 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 GNL2P1-201ENST00000451274 2190 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 GOT2P1-201ENST00000440922 1309 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AC005224.3-201ENST00000584683 2140 ntBASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHKB-CPT1BH3BT56 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 UGT2B26P-201ENST00000508672 1613 ntBASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 AC093535.2-201ENST00000624769 2326 ntBASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 AL672167.1-204ENST00000641875 3017 ntBASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 AP001273.1-201ENST00000624493 3152 ntBASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 AL022393.1-201ENST00000625142 1677 ntBASIC3.15□□□□□ -1.9
CHKB-CPT1BH3BT56 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 ARNTL2-201ENST00000261178 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 FHIT-201ENST00000341848 174 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 RNU1-94P-201ENST00000362627 173 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP71-201ENST00000362967 126 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 RNA5SP378-201ENST00000363646 120 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR671-201ENST00000390183 118 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL445238.1-204ENST00000400311 463 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 NIP7P3-201ENST00000404319 515 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 VN1R33P-201ENST00000411800 887 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 CYTOR-207ENST00000414584 772 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01424-201ENST00000417820 1031 ntTSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL121917.1-202ENST00000424434 367 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 NANOGP4-201ENST00000427230 913 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 CRIP1P1-201ENST00000427567 185 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 KCNQ5-AS1-201ENST00000429832 1101 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 MRLN-202ENST00000430431 495 ntAPPRIS P2 TSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL590128.1-201ENST00000433407 286 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL122003.1-201ENST00000435206 784 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL441992.1-201ENST00000443631 544 ntTSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 RPL23AP28-201ENST00000448062 470 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 MIR4500HG-204ENST00000453832 827 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 FGF7P3-201ENST00000454645 303 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC073594.1-201ENST00000462065 364 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC091982.1-202ENST00000473923 343 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 DUBR-205ENST00000495228 411 ntTSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC114300.1-201ENST00000502347 280 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC009927.2-201ENST00000520812 481 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 SETP17-201ENST00000534163 817 ntBASIC3.15□□□□□ -1.91
CHKB-CPT1BH3BT56 C15orf40-209ENST00000538348 561 ntTSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.8 ms