Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 AC104108.1-201ENST00000509930 412 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 PRELID3BP4-201ENST00000515476 571 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC007068.2-201ENST00000543168 395 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC106791.2-201ENST00000604680 391 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 KLHL8-203ENST00000498875 5175 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 LY75-CD302-201ENST00000504764 5650 ntAPPRIS P4 TSL 2 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 FBXO11-202ENST00000403359 4055 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 MAPK10-285ENST00000641207 2746 ntBASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 CDC40-203ENST00000368932 3933 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
TMEM88BA6NKF7 FRMD6-202ENST00000356218 4768 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 NUP155-201ENST00000231498 8143 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 PPFIBP2-216ENST00000530181 2965 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 GPX5-201ENST00000412168 1540 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 BRD7P2-201ENST00000466133 1944 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 SGO1P2-201ENST00000429458 1589 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 MCM8-202ENST00000378883 3574 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 ZMYND8-221ENST00000619049 4027 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 SNORA40.2-201ENST00000390847 128 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 SNORA17A-201ENST00000391185 133 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 RNU6-192P-201ENST00000391253 100 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL031985.1-201ENST00000392713 418 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL034379.1-201ENST00000423216 253 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 UQCRHP1-204ENST00000424609 274 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL354941.1-201ENST00000438600 464 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 HMGB1P7-201ENST00000450921 612 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC010878.1-201ENST00000456500 1047 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 CDC42P1-201ENST00000456658 548 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 RN7SL254P-201ENST00000460609 284 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC107015.1-201ENST00000466902 747 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 RNA5SP278-201ENST00000517055 102 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC021001.1-201ENST00000518703 987 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 IGHVIII-67-4-201ENST00000524281 296 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 KCTD9P4-201ENST00000526766 1166 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 OR5AK3P-201ENST00000527486 1297 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC135983.3-201ENST00000528049 1226 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC090022.1-201ENST00000546569 311 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC068305.2-201ENST00000550567 1205 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC068790.6-201ENST00000602558 258 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC013244.1-201ENST00000604279 193 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL021368.3-201ENST00000607119 578 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL589743.6-201ENST00000611025 117 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC130456.6-201ENST00000623745 765 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 SNORA17.5-201ENST00000630429 132 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 KCNH7-202ENST00000332142 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC022400.3-201ENST00000399449 3810 ntTSL 5 BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 PKP4-202ENST00000389759 4443 ntAPPRIS P4 TSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC090132.1-201ENST00000524071 1480 ntBASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
TMEM88BA6NKF7 AC004672.1-201ENST00000513082 2088 ntTSL 5 BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 TYW1B-203ENST00000620995 3113 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
TMEM88BA6NKF7 GNG12-201ENST00000370982 4404 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms