Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 NDUFB4-201ENST00000184266 671 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RNU1-24P-201ENST00000364285 165 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC121334.1-201ENST00000396414 802 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AL021331.1-201ENST00000402817 582 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AL139135.1-201ENST00000412675 209 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RAP1BP1-201ENST00000412709 553 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AL662791.3-201ENST00000413771 776 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AL645936.2-201ENST00000430565 928 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR52J1P-201ENST00000450596 932 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RN7SL834P-201ENST00000461450 286 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC135721.2-201ENST00000464237 300 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RN7SL149P-201ENST00000465197 281 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 LINC01182-201ENST00000503532 582 ntTSL 4 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC073648.3-201ENST00000504939 925 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC093668.1-201ENST00000514917 911 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RNU5A-4P-201ENST00000516588 111 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC105185.1-201ENST00000518705 535 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR7E154P-201ENST00000525174 932 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 PDCL3P1-201ENST00000534575 734 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 SLC25A51P2-201ENST00000535708 889 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC008015.1-201ENST00000555505 465 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC092032.1-201ENST00000603090 165 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC011471.4-201ENST00000638271 216 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 OAT-208ENST00000539214 1864 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 TMEM155-203ENST00000394396 2032 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 YES1P1-201ENST00000418510 1628 ntBASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SEC61A2Q9H9S3 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC020978.6-201ENST00000571197 3177 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 PIGN-220ENST00000638167 4195 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC013268.3-201ENST00000262716 2324 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC005034.3-201ENST00000604845 1747 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RNU4-75P-201ENST00000364621 146 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 SNORD116-12-201ENST00000384468 92 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RNU6-796P-201ENST00000391086 107 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 VDAC1P10-201ENST00000416715 891 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 OFD1P11Y-201ENST00000418213 1177 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RPS3AP37-201ENST00000419176 745 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AL513175.2-201ENST00000422071 443 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC009303.1-201ENST00000426307 352 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 OR1M1-201ENST00000429566 1035 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AL604028.2-201ENST00000437848 788 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 NPM1P33-201ENST00000438918 872 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AL592114.2-201ENST00000440142 532 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 AC011742.2-201ENST00000443818 352 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 EEF1B2P5-201ENST00000444820 548 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RPS27AP8-201ENST00000452665 445 ntBASIC6.2□□□□□ -1.42
SEC61A2Q9H9S3 RPL7P45-201ENST00000455851 743 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms