Protein–RNA interactions for Protein: Q9H1Y3

OPN3, Opsin-3, humanhuman

Predicted RBP Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN3Q9H1Y3 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AP001823.1-201ENST00000604056 1003 ntBASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AC092266.1-201ENST00000610958 165 ntBASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AC004801.6-201ENST00000616571 978 ntBASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AL512652.1-201ENST00000619006 500 ntBASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AP001962.1-201ENST00000624114 559 ntBASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 AP002370.1-201ENST00000528055 1602 ntBASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
OPN3Q9H1Y3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC006484.1-201ENST00000435086 1884 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC009779.8-201ENST00000641684 4384 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC105235.1-201ENST00000623208 1816 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 FAM32BP-201ENST00000344033 333 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 RNU1-49P-201ENST00000363468 159 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 RNA5SP478-201ENST00000364657 115 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 MIR130B-202ENST00000385018 82 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 PEX12P1-201ENST00000400284 1048 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 RANP7-201ENST00000418085 644 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 PPIAP10-201ENST00000438675 458 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AL353662.1-201ENST00000439099 327 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 LDHAP1-201ENST00000509421 992 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 SETP21-201ENST00000514799 892 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC027369.2-201ENST00000528030 440 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AL121579.2-201ENST00000555466 590 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC008507.3-201ENST00000585753 472 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC067852.5-201ENST00000589299 310 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC067773.1-201ENST00000603284 1094 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 EEF1A1P9-201ENST00000514975 1383 ntBASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
OPN3Q9H1Y3 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 GUCY1B2-204ENST00000531898 1979 ntBASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 OR11H13P-201ENST00000359695 979 ntBASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 RNA5SP350-201ENST00000363298 111 ntBASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 RN7SKP15-201ENST00000364742 309 ntBASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 LCN1P2-201ENST00000372030 223 ntBASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.5□□□□□ -1.53
OPN3Q9H1Y3 OR3D1P-201ENST00000438288 955 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms