Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
RTFDC1Q9BY42 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RTFDC1Q9BY42 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.55□□□□□ -1.2
RTFDC1Q9BY42 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC7.55□□□□□ -1.2
RTFDC1Q9BY42 AL359976.1-201ENST00000418655 3528 ntBASIC7.55□□□□□ -1.2
RTFDC1Q9BY42 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL669831.5-218ENST00000591702 1873 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MIR640-201ENST00000385086 96 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 SNORA40.4-201ENST00000390971 128 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 OR1F12-201ENST00000402365 945 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MIR1178-201ENST00000408396 91 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 RN7SKP278-201ENST00000410504 342 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC098592.2-201ENST00000413158 265 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL513325.1-201ENST00000417716 1034 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 GAPDHP23-201ENST00000444823 993 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL445466.1-201ENST00000448432 357 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 HGF-207ENST00000453018 721 ntTSL 3 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL122020.1-201ENST00000472287 459 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC135999.1-201ENST00000478962 479 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC092474.3-201ENST00000603022 568 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC013731.1-201ENST00000604340 883 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL645933.2-201ENST00000606743 1207 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC006213.4-201ENST00000616184 634 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL356490.1-201ENST00000623079 479 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AL357562.1-201ENST00000624911 609 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC123769.2-201ENST00000624332 5984 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MAPK10-287ENST00000641217 3037 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 AC062029.1-202ENST00000606164 3651 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 MAPK10-323ENST00000641493 3207 ntBASIC7.54□□□□□ -1.2
RTFDC1Q9BY42 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 ZNF101P1-201ENST00000435701 1720 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 RNU6-697P-201ENST00000363348 107 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AL358178.1-201ENST00000407698 397 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 RCC2P2-201ENST00000422174 918 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 FAR1P1-201ENST00000427163 934 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 ZFAND6P1-201ENST00000434138 605 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 MTCO3P43-201ENST00000440974 771 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 RANP2-201ENST00000456833 229 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 OR9N1P-201ENST00000491296 333 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 IGKV2-19-201ENST00000518132 283 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AC112191.2-201ENST00000522428 333 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AC006518.1-201ENST00000541449 943 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 LINC00557-201ENST00000563184 1279 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AC009120.3-201ENST00000563335 499 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 MTND4LP25-201ENST00000570218 163 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AC005014.3-201ENST00000605985 190 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 AC123769.1-201ENST00000530992 3192 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 MTND4P21-201ENST00000453886 1357 ntBASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC7.53□□□□□ -1.2
RTFDC1Q9BY42 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms