Protein–RNA interactions for Protein: Q92547

TOPBP1, DNA topoisomerase 2-binding protein 1, humanhuman

Predictions only

Length 1,522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1Q92547 AC008175.1-201ENST00000446299 2939 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
TOPBP1Q92547 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
TOPBP1Q92547 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TOPBP1Q92547 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TOPBP1Q92547 POGK-201ENST00000367875 6254 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 RPL26P29-201ENST00000415623 438 ntBASIC9.69□□□□□ -0.86
TOPBP1Q92547 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 RPL23AP40-201ENST00000487630 390 ntBASIC9.69□□□□□ -0.86
TOPBP1Q92547 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TOPBP1Q92547 RN7SL591P-201ENST00000496150 292 ntBASIC9.69□□□□□ -0.86
TOPBP1Q92547 AC110716.1-201ENST00000506934 607 ntTSL 2 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 AC011840.5-201ENST00000582125 771 ntBASIC9.69□□□□□ -0.86
TOPBP1Q92547 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
TOPBP1Q92547 ARHGAP42P2-201ENST00000416089 2140 ntBASIC9.69□□□□□ -0.86
TOPBP1Q92547 AOX3P-204ENST00000491025 2107 ntBASIC9.69□□□□□ -0.86
TOPBP1Q92547 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
TOPBP1Q92547 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
TOPBP1Q92547 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOPBP1Q92547 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOPBP1Q92547 AF131215.2-201ENST00000531549 1710 ntBASIC9.68□□□□□ -0.86
TOPBP1Q92547 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TOPBP1Q92547 ARMC8-210ENST00000469044 4790 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 AC019205.1-201ENST00000421830 730 ntBASIC9.68□□□□□ -0.86
TOPBP1Q92547 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 AL389915.2-201ENST00000454576 441 ntBASIC9.68□□□□□ -0.86
TOPBP1Q92547 RN7SL51P-201ENST00000468230 285 ntBASIC9.68□□□□□ -0.86
TOPBP1Q92547 CCDC11P1-201ENST00000503137 1162 ntBASIC9.68□□□□□ -0.86
TOPBP1Q92547 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 AC105105.5-201ENST00000622635 1294 ntBASIC9.68□□□□□ -0.86
TOPBP1Q92547 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 MID1-203ENST00000380780 6195 ntAPPRIS P1 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOPBP1Q92547 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC9.68□□□□□ -0.86
TOPBP1Q92547 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.86
TOPBP1Q92547 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC9.68□□□□□ -0.86
TOPBP1Q92547 MAPK10-323ENST00000641493 3207 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOPBP1Q92547 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
TOPBP1Q92547 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
TOPBP1Q92547 FAM32BP-201ENST00000344033 333 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 RNA5SP305-201ENST00000362665 119 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOPBP1Q92547 AC023141.8-201ENST00000442554 208 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 CEACAMP7-201ENST00000444105 496 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 OR13K1P-201ENST00000444577 975 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 DNAJB5P1-201ENST00000454004 806 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC9.67□□□□□ -0.86
TOPBP1Q92547 RPS29P22-201ENST00000472363 168 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 AC007686.1-201ENST00000488511 463 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC9.67□□□□□ -0.86
TOPBP1Q92547 MIR4330-201ENST00000579077 105 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 AL355974.3-201ENST00000617383 467 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 SAMMSON-209ENST00000641222 1100 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC9.67□□□□□ -0.86
TOPBP1Q92547 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
TOPBP1Q92547 AC009166.2-201ENST00000624410 2833 ntBASIC9.67□□□□□ -0.86
TOPBP1Q92547 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC9.67□□□□□ -0.86
TOPBP1Q92547 FAM199X-202ENST00000493442 7457 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOPBP1Q92547 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC9.67□□□□□ -0.86
TOPBP1Q92547 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOPBP1Q92547 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
TOPBP1Q92547 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 MIR130A-201ENST00000385274 89 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 AL772161.1-201ENST00000439130 476 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC090142.2-201ENST00000483263 416 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC006116.3-201ENST00000592968 361 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 MEF2A-201ENST00000338042 5464 ntAPPRIS ALT1 TSL 2 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AC026951.1-201ENST00000559530 2459 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 PARP4P1-201ENST00000435945 2337 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 IMMTP1-201ENST00000435590 2219 ntBASIC9.66□□□□□ -0.86
TOPBP1Q92547 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 DPY19L3-205ENST00000586987 5925 ntTSL 5 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC9.66□□□□□ -0.86
TOPBP1Q92547 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TOPBP1Q92547 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms