Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 IGLC4-201ENST00000517690 248 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC008429.4-201ENST00000521201 182 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AL132640.1-201ENST00000559594 619 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 MIR4502-201ENST00000580432 81 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 MIR3614-201ENST00000581261 86 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC011447.2-201ENST00000592921 283 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC104820.1-201ENST00000624183 307 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC010325.3-201ENST00000641084 394 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 PSG2-202ENST00000406487 1538 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AC245100.2-201ENST00000454544 1679 ntBASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDLIM3Q53GG5 AP005432.1-201ENST00000580891 3485 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AL161912.4-201ENST00000623889 2468 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 PSMA6P1-201ENST00000400275 741 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 MARK2P12-201ENST00000420129 585 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC079355.1-201ENST00000421770 223 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 IPPKP1-201ENST00000422501 768 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 NIPA2P1-201ENST00000426223 976 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC097721.1-201ENST00000427150 1253 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AL355355.1-201ENST00000442900 793 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 MYO5BP2-201ENST00000449815 1277 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC089999.1-201ENST00000460336 374 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 TDGP1-201ENST00000543961 1229 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC037479.1-201ENST00000558361 625 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC009268.1-201ENST00000561352 1203 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC025283.1-201ENST00000572039 734 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 uc_338.31-201ENST00000615595 186 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC119674.1-213ENST00000641177 1386 ntBASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PDLIM3Q53GG5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 246.3 ms