Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 OR11H2-202ENST00000641517 1085 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 AL161891.1-201ENST00000621575 4636 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 PPFIA2-205ENST00000541570 2976 ntTSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AC073055.1-201ENST00000456901 1621 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
PCDH1Q08174 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 AL034417.4-202ENST00000642135 2236 ntBASIC7.19□□□□□ -1.26
PCDH1Q08174 NT5C3A-201ENST00000242210 1670 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
PCDH1Q08174 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
PCDH1Q08174 AL391380.1-201ENST00000439300 1432 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 ASAH1-267ENST00000637991 2399 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 LPAR1-205ENST00000541779 2490 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 RMST-210ENST00000640149 2844 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 RNU6-931P-201ENST00000363850 107 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 RPL7P8-201ENST00000411964 730 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 CRIP1P3-201ENST00000416794 220 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC130472.1-201ENST00000427885 309 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC002066.1-202ENST00000439070 699 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC114755.4-201ENST00000439114 443 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDH1Q08174 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC092687.2-201ENST00000452909 568 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC067817.2-201ENST00000459965 387 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 RPS18P13-201ENST00000461260 454 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 MTCO3P38-201ENST00000468910 766 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 RPL7P18-201ENST00000478965 734 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC073358.1-201ENST00000505671 684 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AP001317.1-201ENST00000531194 960 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 OR6M3P-201ENST00000531567 700 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 PPIAL4D-201ENST00000544708 495 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC027688.2-201ENST00000569009 511 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 ABBA01006766.1-201ENST00000584728 294 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC009237.12-201ENST00000604755 742 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 AC025253.1-201ENST00000613623 543 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC127502.3-201ENST00000636170 1206 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC092447.7-201ENST00000422212 1621 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.18□□□□□ -1.26
PCDH1Q08174 AP003471.1-202ENST00000319051 1988 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
PCDH1Q08174 HSD17B4-212ENST00000509514 2314 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
PCDH1Q08174 AC068733.2-201ENST00000605434 1418 ntBASIC7.18□□□□□ -1.26
PCDH1Q08174 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC7.18□□□□□ -1.26
PCDH1Q08174 GOLGA6L6-201ENST00000619213 4013 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 LINC00184-201ENST00000429269 2270 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 CORO1C-202ENST00000420959 3921 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.17□□□□□ -1.26
PCDH1Q08174 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 NRCAM-204ENST00000379028 6685 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 OR4D1-201ENST00000268912 1024 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
PCDH1Q08174 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
PCDH1Q08174 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
PCDH1Q08174 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms