Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS1Q01581 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.75□□□□□ -1.49
HMGCS1Q01581 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
HMGCS1Q01581 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS1Q01581 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
HMGCS1Q01581 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
HMGCS1Q01581 AC027575.3-201ENST00000583058 2747 ntBASIC5.75□□□□□ -1.49
HMGCS1Q01581 KYNUP3-201ENST00000574386 1341 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 MAPK10-261ENST00000641050 3109 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC130304.1-201ENST00000622942 2385 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 FUNDC2P3-201ENST00000334716 533 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 RNU1-134P-201ENST00000362935 165 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 YWHAZP6-201ENST00000399764 738 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 SNRPEP6-201ENST00000407465 277 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AL035422.1-201ENST00000414193 397 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC023141.3-201ENST00000436698 278 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 FTLP8-201ENST00000446770 267 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC104164.1-201ENST00000460282 590 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 MIR3154-201ENST00000577829 84 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 MIR6721-201ENST00000617181 87 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AL109924.4-201ENST00000623089 670 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AL357562.1-201ENST00000624911 609 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC073488.6-201ENST00000632293 754 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 AC015799.1-201ENST00000622996 3122 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 CDY3P-201ENST00000454543 1618 ntBASIC5.74□□□□□ -1.49
HMGCS1Q01581 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.74□□□□□ -1.49
HMGCS1Q01581 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
HMGCS1Q01581 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 RNA5SP232-201ENST00000364144 119 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 RNA5SP279-201ENST00000365513 117 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 RBBP4P5-201ENST00000398583 1266 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC099535.1-201ENST00000408928 371 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC092865.3-201ENST00000425390 1026 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC130360.1-201ENST00000425489 1117 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC108479.1-201ENST00000431142 427 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC010240.2-201ENST00000445363 1205 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC083795.1-201ENST00000491760 320 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AP002453.1-201ENST00000492327 668 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC108103.1-201ENST00000511286 446 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 snoU109.5-201ENST00000516231 132 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 OR7E158P-201ENST00000524483 910 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC130365.2-201ENST00000525882 1201 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HMGCS1Q01581 MIR4701-201ENST00000583094 63 ntBASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.73□□□□□ -1.49
HMGCS1Q01581 MIR6806-201ENST00000622141 64 ntBASIC5.73□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms