Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC109439.2-201ENST00000502421 564 ntTSL 4 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC091163.3-201ENST00000518269 1144 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NKX6-1P78426 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 MIR378C-201ENST00000578683 81 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC011824.1-201ENST00000584863 561 ntTSL 4 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AP001160.4-201ENST00000596971 382 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 BNIP3P32-201ENST00000600015 554 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 AL137000.1-201ENST00000610528 1244 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 MIR6778-201ENST00000617912 73 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 AC022079.2-201ENST00000619739 566 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 AC241377.1-201ENST00000619797 406 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 AL049541.2-201ENST00000626377 555 ntBASIC6.07□□□□□ -1.44
NKX6-1P78426 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
NKX6-1P78426 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NKX6-1P78426 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
NKX6-1P78426 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
NKX6-1P78426 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
NKX6-1P78426 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.07□□□□□ -1.44
NKX6-1P78426 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
NKX6-1P78426 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.07□□□□□ -1.44
NKX6-1P78426 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
NKX6-1P78426 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC6.06□□□□□ -1.44
NKX6-1P78426 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
NKX6-1P78426 OR4C1P-202ENST00000641065 1569 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC6.06□□□□□ -1.44
NKX6-1P78426 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 OR4F17-203ENST00000618231 2586 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NKX6-1P78426 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 NQO1-202ENST00000379046 1105 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 RNA5SP176-201ENST00000390956 110 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 ATP5HP3-201ENST00000396994 486 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AF228730.1-201ENST00000397972 663 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC244452.1-201ENST00000413798 141 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 AC005189.1-201ENST00000431286 310 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 NPM1P23-201ENST00000440193 849 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 AL358794.1-201ENST00000445689 381 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 TIMM8BP2-201ENST00000445940 251 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC6.06□□□□□ -1.44
NKX6-1P78426 DPP10-AS1-202ENST00000448663 644 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 LRRC37A14P-201ENST00000452297 462 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC118758.1-202ENST00000454719 225 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC023245.1-201ENST00000468501 517 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC079080.1-201ENST00000479841 822 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 RPS3AP15-201ENST00000483874 781 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 RPL34P33-201ENST00000486062 334 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC107398.1-201ENST00000486904 505 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX6-1P78426 FTH1P8-201ENST00000498161 514 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC105233.1-201ENST00000498840 781 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 PRELID3BP5-201ENST00000508612 460 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC147055.3-201ENST00000510547 851 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC108103.1-201ENST00000511286 446 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.06□□□□□ -1.44
NKX6-1P78426 AP005902.2-201ENST00000518393 307 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 EEF1A1P37-201ENST00000522748 715 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
NKX6-1P78426 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.06□□□□□ -1.44
NKX6-1P78426 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX6-1P78426 OR4C49P-201ENST00000563891 900 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC026458.1-201ENST00000564330 438 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC009712.1-201ENST00000564938 316 ntBASIC6.06□□□□□ -1.44
NKX6-1P78426 AC026461.2-201ENST00000568608 244 ntTSL 5 BASIC6.06□□□□□ -1.44
NKX6-1P78426 MIR3157-201ENST00000578688 85 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms