Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC011411.1-201ENST00000509592 876 ntBASIC5.01□□□□□ -1.61
LMO4P61968 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 PCNAP4-201ENST00000532690 730 ntBASIC5.01□□□□□ -1.61
LMO4P61968 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.01□□□□□ -1.61
LMO4P61968 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.01□□□□□ -1.61
LMO4P61968 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.01□□□□□ -1.61
LMO4P61968 ZNF322P1-201ENST00000568013 1209 ntBASIC5.01□□□□□ -1.61
LMO4P61968 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 AC024589.2-201ENST00000605642 1294 ntBASIC5.01□□□□□ -1.61
LMO4P61968 AL021368.3-201ENST00000607119 578 ntBASIC5.01□□□□□ -1.61
LMO4P61968 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.01□□□□□ -1.61
LMO4P61968 CASC22-202ENST00000628396 802 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.01□□□□□ -1.61
LMO4P61968 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.01□□□□□ -1.61
LMO4P61968 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
LMO4P61968 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
LMO4P61968 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 AL391261.1-201ENST00000555712 1479 ntBASIC5□□□□□ -1.61
LMO4P61968 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5□□□□□ -1.61
LMO4P61968 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC5□□□□□ -1.61
LMO4P61968 AC078880.4-201ENST00000617627 1749 ntBASIC5□□□□□ -1.61
LMO4P61968 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5□□□□□ -1.61
LMO4P61968 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 PIK3C3-202ENST00000398870 9206 ntTSL 2 BASIC5□□□□□ -1.61
LMO4P61968 CDY5P-201ENST00000411487 1580 ntBASIC5□□□□□ -1.61
LMO4P61968 CDY9P-201ENST00000451397 1580 ntBASIC5□□□□□ -1.61
LMO4P61968 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LMO4P61968 TMSB4XP4-201ENST00000323496 618 ntBASIC5□□□□□ -1.61
LMO4P61968 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5□□□□□ -1.61
LMO4P61968 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
LMO4P61968 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC5□□□□□ -1.61
LMO4P61968 RN7SKP161-201ENST00000411110 305 ntBASIC5□□□□□ -1.61
LMO4P61968 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5□□□□□ -1.61
LMO4P61968 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 AC117434.1-201ENST00000419971 836 ntBASIC5□□□□□ -1.61
LMO4P61968 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5□□□□□ -1.61
LMO4P61968 NPM1P48-201ENST00000436002 853 ntBASIC5□□□□□ -1.61
LMO4P61968 BTBD7P2-201ENST00000441962 620 ntBASIC5□□□□□ -1.61
LMO4P61968 AL355355.1-201ENST00000442900 793 ntBASIC5□□□□□ -1.61
LMO4P61968 BMS1P10-201ENST00000443754 1120 ntBASIC5□□□□□ -1.61
LMO4P61968 AL161636.2-201ENST00000445179 927 ntBASIC5□□□□□ -1.61
LMO4P61968 AC036101.1-201ENST00000449272 597 ntTSL 3 BASIC5□□□□□ -1.61
LMO4P61968 AL445665.1-202ENST00000452436 324 ntBASIC5□□□□□ -1.61
LMO4P61968 AC023245.1-201ENST00000468501 517 ntBASIC5□□□□□ -1.61
LMO4P61968 RN7SL174P-201ENST00000475578 289 ntBASIC5□□□□□ -1.61
LMO4P61968 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5□□□□□ -1.61
LMO4P61968 AC106872.4-201ENST00000510050 523 ntBASIC5□□□□□ -1.61
LMO4P61968 RNU6-551P-201ENST00000516661 103 ntBASIC5□□□□□ -1.61
LMO4P61968 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC5□□□□□ -1.61
LMO4P61968 AP005639.1-201ENST00000526939 192 ntBASIC5□□□□□ -1.61
LMO4P61968 AC079600.1-201ENST00000550326 297 ntBASIC5□□□□□ -1.61
LMO4P61968 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC5□□□□□ -1.61
LMO4P61968 AC135626.1-201ENST00000556983 435 ntBASIC5□□□□□ -1.61
LMO4P61968 AL356801.1-201ENST00000559320 294 ntBASIC5□□□□□ -1.61
LMO4P61968 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5□□□□□ -1.61
LMO4P61968 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC5□□□□□ -1.61
LMO4P61968 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LMO4P61968 AC090286.3-201ENST00000573133 187 ntBASIC5□□□□□ -1.61
LMO4P61968 AC020916.2-201ENST00000591242 360 ntBASIC5□□□□□ -1.61
LMO4P61968 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5□□□□□ -1.61
LMO4P61968 COX6CP7-201ENST00000597056 208 ntBASIC5□□□□□ -1.61
LMO4P61968 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5□□□□□ -1.61
LMO4P61968 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 AL034408.1-201ENST00000637712 664 ntBASIC5□□□□□ -1.61
LMO4P61968 AC116667.2-201ENST00000641075 823 ntBASIC5□□□□□ -1.61
LMO4P61968 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5□□□□□ -1.61
LMO4P61968 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LMO4P61968 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5□□□□□ -1.61
LMO4P61968 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
LMO4P61968 OR2T2-202ENST00000641925 3530 ntAPPRIS P1 BASIC5□□□□□ -1.61
LMO4P61968 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LMO4P61968 AL132656.3-201ENST00000606384 1595 ntBASIC4.99□□□□□ -1.61
LMO4P61968 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC4.99□□□□□ -1.61
LMO4P61968 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LMO4P61968 CR383656.5-201ENST00000547616 1340 ntBASIC4.99□□□□□ -1.61
LMO4P61968 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms