Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 IGKV2-19-201ENST00000518132 283 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC6.51□□□□□ -1.37
HDAC4P56524 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.51□□□□□ -1.37
HDAC4P56524 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.51□□□□□ -1.37
HDAC4P56524 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC6.51□□□□□ -1.37
HDAC4P56524 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 NPIPB1P-202ENST00000588786 828 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.51□□□□□ -1.37
HDAC4P56524 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.51□□□□□ -1.37
HDAC4P56524 DYNLL1P1-201ENST00000595442 269 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 MIR7109-201ENST00000613748 65 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.51□□□□□ -1.37
HDAC4P56524 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.51□□□□□ -1.37
HDAC4P56524 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.51□□□□□ -1.37
HDAC4P56524 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
HDAC4P56524 HDAC1P2-201ENST00000453661 1398 ntBASIC6.51□□□□□ -1.37
HDAC4P56524 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.51□□□□□ -1.37
HDAC4P56524 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
HDAC4P56524 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.51□□□□□ -1.37
HDAC4P56524 AC096921.2-201ENST00000561507 1916 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 DNM1P47-203ENST00000571780 12667 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AL355834.1-201ENST00000556602 3965 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.5□□□□□ -1.37
HDAC4P56524 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
HDAC4P56524 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 RNU1-49P-201ENST00000363468 159 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 U3.23-201ENST00000391132 200 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AC092642.1-201ENST00000392417 425 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 PSMA6P1-201ENST00000400275 741 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.5□□□□□ -1.37
HDAC4P56524 TRGV7-201ENST00000427089 353 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC6.5□□□□□ -1.37
HDAC4P56524 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC009963.4-201ENST00000448535 339 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC098818.1-201ENST00000478593 252 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC113398.2-201ENST00000507630 558 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 RN7SKP67-201ENST00000515905 235 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AC110056.1-201ENST00000525759 911 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC6.5□□□□□ -1.37
HDAC4P56524 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC090888.3-201ENST00000558917 509 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 AL359091.2-201ENST00000609303 556 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AL137246.2-201ENST00000613439 662 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.5□□□□□ -1.37
HDAC4P56524 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 OR7A1P-202ENST00000641542 1158 ntBASIC6.5□□□□□ -1.37
HDAC4P56524 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.5□□□□□ -1.37
HDAC4P56524 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.5□□□□□ -1.37
HDAC4P56524 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC6.5□□□□□ -1.37
HDAC4P56524 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
HDAC4P56524 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
HDAC4P56524 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HDAC4P56524 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC6.49□□□□□ -1.37
HDAC4P56524 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
HDAC4P56524 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HDAC4P56524 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
HDAC4P56524 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 SNORA43.1-201ENST00000364863 140 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
HDAC4P56524 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.49□□□□□ -1.37
HDAC4P56524 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.49□□□□□ -1.37
HDAC4P56524 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.49□□□□□ -1.37
HDAC4P56524 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC6.49□□□□□ -1.37
HDAC4P56524 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC6.49□□□□□ -1.37
HDAC4P56524 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.49□□□□□ -1.37
HDAC4P56524 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 AC007386.1-201ENST00000455212 582 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 AL022319.1-201ENST00000458183 1167 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.49□□□□□ -1.37
HDAC4P56524 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.49□□□□□ -1.37
HDAC4P56524 ZNF519P4-201ENST00000514008 125 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 AC036111.2-201ENST00000533247 901 ntBASIC6.49□□□□□ -1.37
HDAC4P56524 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms