Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
CDH12P55289 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CDH12P55289 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.77□□□□□ -1.49
CDH12P55289 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CDH12P55289 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CDH12P55289 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH12P55289 MIR1266-201ENST00000408125 84 ntBASIC5.76□□□□□ -1.49
CDH12P55289 RPL12P43-201ENST00000420608 499 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC092651.1-201ENST00000426110 312 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC017019.1-201ENST00000426129 261 ntBASIC5.76□□□□□ -1.49
CDH12P55289 MTND4LP14-201ENST00000429447 288 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AL645939.3-201ENST00000435408 225 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH12P55289 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH12P55289 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 NPM1P9-201ENST00000453156 844 ntBASIC5.76□□□□□ -1.49
CDH12P55289 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH12P55289 RANP2-201ENST00000456833 229 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC063955.1-201ENST00000462872 685 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 AC122714.1-201ENST00000502510 459 ntBASIC5.76□□□□□ -1.49
CDH12P55289 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH12P55289 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.76□□□□□ -1.49
CDH12P55289 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
CDH12P55289 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH12P55289 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH12P55289 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 AC084851.2-201ENST00000530377 364 ntBASIC5.76□□□□□ -1.49
CDH12P55289 RPA2P3-201ENST00000533268 770 ntBASIC5.76□□□□□ -1.49
CDH12P55289 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CDH12P55289 AC009729.1-201ENST00000548873 1133 ntBASIC5.76□□□□□ -1.49
CDH12P55289 MTND2P17-201ENST00000550281 688 ntBASIC5.76□□□□□ -1.49
CDH12P55289 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH12P55289 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH12P55289 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH12P55289 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.76□□□□□ -1.49
CDH12P55289 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH12P55289 MIR132-201ENST00000591554 101 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.76□□□□□ -1.49
CDH12P55289 AC036176.3-201ENST00000602456 418 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC004890.3-201ENST00000605566 1095 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AL589743.6-201ENST00000611025 117 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC097372.4-201ENST00000625025 466 ntBASIC5.76□□□□□ -1.49
CDH12P55289 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH12P55289 AC063952.1-203ENST00000634410 658 ntBASIC5.76□□□□□ -1.49
CDH12P55289 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH12P55289 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.76□□□□□ -1.49
CDH12P55289 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CDH12P55289 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CDH12P55289 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.76□□□□□ -1.49
CDH12P55289 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH12P55289 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 AL513548.1-201ENST00000562904 1724 ntBASIC5.75□□□□□ -1.49
CDH12P55289 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CDH12P55289 AL033519.1-201ENST00000407266 307 ntBASIC5.75□□□□□ -1.49
CDH12P55289 PLGLB1-202ENST00000409310 960 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 MTND4LP21-201ENST00000415303 295 ntBASIC5.75□□□□□ -1.49
CDH12P55289 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH12P55289 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH12P55289 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 NPM1P25-201ENST00000429734 854 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AL365220.1-201ENST00000432923 399 ntBASIC5.75□□□□□ -1.49
CDH12P55289 GTF2IP14-201ENST00000441415 586 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AL158053.1-201ENST00000441503 453 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC016908.1-201ENST00000442571 1219 ntBASIC5.75□□□□□ -1.49
CDH12P55289 RPL31P11-202ENST00000454082 372 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH12P55289 snoU13.29-201ENST00000459370 104 ntBASIC5.75□□□□□ -1.49
CDH12P55289 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH12P55289 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH12P55289 OR9N1P-201ENST00000491296 333 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CDH12P55289 AC117525.1-201ENST00000515228 503 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH12P55289 RNA5SP96-201ENST00000516041 107 ntBASIC5.75□□□□□ -1.49
CDH12P55289 SNORA81.2-201ENST00000516868 170 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.75□□□□□ -1.49
CDH12P55289 AP003080.1-202ENST00000526526 915 ntBASIC5.75□□□□□ -1.49
CDH12P55289 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CDH12P55289 HNRNPCP1-201ENST00000556181 766 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC027796.1-201ENST00000575593 512 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.75□□□□□ -1.49
CDH12P55289 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.75□□□□□ -1.49
CDH12P55289 AC005332.4-201ENST00000592752 579 ntBASIC5.75□□□□□ -1.49
CDH12P55289 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms