Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 RNA5SP110-201ENST00000362638 115 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMARCA1P28370 ELOCP6-201ENST00000429066 328 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.17□□□□□ -1.26
SMARCA1P28370 ELOCP12-201ENST00000458706 328 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 AC104339.1-201ENST00000465478 348 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC7.17□□□□□ -1.26
SMARCA1P28370 Vault.2-201ENST00000516519 98 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 RN7SKP70-201ENST00000516655 271 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 Y_RNA.710-201ENST00000516975 110 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC7.17□□□□□ -1.26
SMARCA1P28370 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC7.17□□□□□ -1.26
SMARCA1P28370 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.17□□□□□ -1.26
SMARCA1P28370 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC092332.1-201ENST00000563684 829 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC008555.7-201ENST00000605008 583 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 AL352984.2-201ENST00000611153 546 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 AL162233.1-201ENST00000620014 944 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC7.17□□□□□ -1.26
SMARCA1P28370 AC008957.3-201ENST00000624112 2242 ntBASIC7.17□□□□□ -1.26
SMARCA1P28370 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
SMARCA1P28370 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
SMARCA1P28370 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMARCA1P28370 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SMARCA1P28370 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMARCA1P28370 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SMARCA1P28370 BRAFP1-201ENST00000445336 2703 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC027575.3-201ENST00000583058 2747 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SMARCA1P28370 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.16□□□□□ -1.26
SMARCA1P28370 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.16□□□□□ -1.26
SMARCA1P28370 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AP000568.1-201ENST00000282964 442 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
SMARCA1P28370 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC7.16□□□□□ -1.26
SMARCA1P28370 GCNT1P4-201ENST00000404096 329 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 RNA5SP115-201ENST00000411160 107 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 MTND2P15-201ENST00000418575 892 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 HSFY7P-201ENST00000432672 318 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 PNKDP1-201ENST00000435914 430 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC7.16□□□□□ -1.26
SMARCA1P28370 HSFY8P-201ENST00000437934 318 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.16□□□□□ -1.26
SMARCA1P28370 OR6C72P-201ENST00000451403 892 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC002553.3-201ENST00000453002 341 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 HSFY5P-201ENST00000453726 309 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AP000547.1-201ENST00000454360 617 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC002075.1-201ENST00000457396 676 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AC021146.10-201ENST00000515628 706 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC7.16□□□□□ -1.26
SMARCA1P28370 OR4R2P-201ENST00000530815 597 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC006512.2-201ENST00000543250 486 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 MIR4502-201ENST00000580432 81 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 NPM1P45-201ENST00000583151 559 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AP001437.1-201ENST00000608783 456 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AL512506.1-201ENST00000613918 449 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC009032.1-201ENST00000617574 431 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AL359742.1-201ENST00000622497 540 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC073593.1-201ENST00000624500 411 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AC003992.1-201ENST00000635364 557 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC106858.1-201ENST00000637497 429 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC116667.2-201ENST00000641075 823 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 OR7A1P-202ENST00000641542 1158 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AP001541.1-201ENST00000623322 1904 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMARCA1P28370 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SMARCA1P28370 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC7.16□□□□□ -1.26
SMARCA1P28370 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SMARCA1P28370 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AOX3P-204ENST00000491025 2107 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 AC104966.1-201ENST00000467010 1464 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.16□□□□□ -1.26
SMARCA1P28370 AC018717.1-201ENST00000457712 1505 ntBASIC7.16□□□□□ -1.26
SMARCA1P28370 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SMARCA1P28370 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.16□□□□□ -1.26
SMARCA1P28370 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
SMARCA1P28370 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
SMARCA1P28370 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.15□□□□□ -1.26
SMARCA1P28370 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.15□□□□□ -1.26
SMARCA1P28370 AC107977.1-201ENST00000355745 939 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 HMGA1P8-201ENST00000414130 321 ntBASIC7.15□□□□□ -1.26
SMARCA1P28370 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms