Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC8.05□□□□□ -1.12
ERCC3P19447 RN7SL390P-201ENST00000470634 284 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 MGST2-204ENST00000506797 634 ntTSL 2 BASIC8.05□□□□□ -1.12
ERCC3P19447 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 MTCYBP44-201ENST00000514835 823 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 PTTG3P-201ENST00000521862 606 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC8.05□□□□□ -1.12
ERCC3P19447 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC8.05□□□□□ -1.12
ERCC3P19447 RBM22P1-201ENST00000578589 1214 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 AC104984.3-201ENST00000581946 546 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 MIR6503-201ENST00000622884 86 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 TEX41-293ENST00000630451 690 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC8.05□□□□□ -1.12
ERCC3P19447 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
ERCC3P19447 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 ATP5BP1-201ENST00000411980 1574 ntBASIC8.05□□□□□ -1.12
ERCC3P19447 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC8.05□□□□□ -1.12
ERCC3P19447 TGFBR3-207ENST00000525962 3927 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
ERCC3P19447 UTY-212ENST00000545955 6817 ntAPPRIS P5 TSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC8.05□□□□□ -1.12
ERCC3P19447 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
ERCC3P19447 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
ERCC3P19447 OR1C1-201ENST00000408896 1307 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
ERCC3P19447 NF1-214ENST00000490416 1329 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 API5P1-201ENST00000424316 1510 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 HTR1D-201ENST00000374619 2835 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
ERCC3P19447 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 BVES-AS1-202ENST00000369122 1716 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
ERCC3P19447 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
ERCC3P19447 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
ERCC3P19447 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 RNU1-5P-201ENST00000362684 144 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 RNA5SP27-201ENST00000363839 119 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 DNAJC19P6-201ENST00000401853 280 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 RNA5SP155-201ENST00000411154 129 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC8.04□□□□□ -1.12
ERCC3P19447 OR4A8-201ENST00000418689 945 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
ERCC3P19447 RPS3AP37-201ENST00000419176 745 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC8.04□□□□□ -1.12
ERCC3P19447 RPSAP40-201ENST00000442343 891 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 SETD6P1-201ENST00000444575 317 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 SEPT14P24-201ENST00000447236 180 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 OR51P1P-201ENST00000447547 942 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 RPS18P1-201ENST00000447840 458 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AC092685.1-201ENST00000447960 1243 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 MRPL35P2-201ENST00000448009 511 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC010878.1-201ENST00000456500 1047 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AC019084.1-201ENST00000457337 432 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 RPS26P11-201ENST00000463445 348 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AC021205.1-201ENST00000468797 348 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 RPS26P6-201ENST00000475156 348 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 RN7SL143P-201ENST00000496780 297 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 SSX8-201ENST00000506270 579 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC087672.3-201ENST00000519323 738 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
ERCC3P19447 IGLVV-66-201ENST00000523818 341 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC8.04□□□□□ -1.12
ERCC3P19447 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 AP003033.2-201ENST00000528901 805 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 OR5BK1P-201ENST00000550421 823 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC8.04□□□□□ -1.12
ERCC3P19447 MTND4P33-201ENST00000556706 766 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 MIR212-201ENST00000586026 110 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC8.04□□□□□ -1.12
ERCC3P19447 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC8.04□□□□□ -1.12
ERCC3P19447 AC021171.1-201ENST00000603137 706 ntBASIC8.04□□□□□ -1.12
ERCC3P19447 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms